Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | JV59_RS01510 | Genome accession | NZ_CP009264 |
| Coordinates | 288060..288665 (-) | Length | 201 a.a. |
| NCBI ID | WP_006958122.1 | Uniprot ID | A0A2A2CS00 |
| Organism | Vibrio coralliilyticus strain OCN014 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 283060..293665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JV59_RS01500 (JV59_01480) | aceF | 284367..286256 (+) | 1890 | WP_038509664.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| JV59_RS01505 (JV59_01485) | lpdA | 286512..287942 (+) | 1431 | WP_006958123.1 | dihydrolipoyl dehydrogenase | - |
| JV59_RS01510 (JV59_01490) | opaR | 288060..288665 (-) | 606 | WP_006958122.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| JV59_RS01515 (JV59_01495) | hpt | 288972..289502 (+) | 531 | WP_006958121.1 | hypoxanthine phosphoribosyltransferase | - |
| JV59_RS01520 (JV59_01500) | can | 289560..290219 (-) | 660 | WP_006958120.1 | carbonate dehydratase | - |
| JV59_RS01525 (JV59_01505) | - | 290574..292244 (+) | 1671 | WP_021457058.1 | SulP family inorganic anion transporter | - |
| JV59_RS01530 (JV59_01510) | - | 292445..293359 (+) | 915 | WP_038509668.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23243.41 Da Isoelectric Point: 5.2990
>NTDB_id=127849 JV59_RS01510 WP_006958122.1 288060..288665(-) (opaR) [Vibrio coralliilyticus strain OCN014]
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
Nucleotide
Download Length: 606 bp
>NTDB_id=127849 JV59_RS01510 WP_006958122.1 288060..288665(-) (opaR) [Vibrio coralliilyticus strain OCN014]
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCACAAAAACGTAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACAGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCGCTGTTTGTTACGACAAACC
GTACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGTGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCACTGTTTGTGCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCACAAAAACGTAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACAGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCGCTGTTTGTTACGACAAACC
GTACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGTGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCACTGTTTGTGCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
85 |
99.502 |
0.846 |
| hapR | Vibrio cholerae C6706 |
76.382 |
99.005 |
0.756 |
| hapR | Vibrio cholerae strain A1552 |
76.382 |
99.005 |
0.756 |