Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | VV93_RS12520 | Genome accession | NZ_CP009261 |
| Coordinates | 2740528..2741145 (+) | Length | 205 a.a. |
| NCBI ID | WP_011079558.1 | Uniprot ID | Q7MHU7 |
| Organism | Vibrio vulnificus strain 93U204 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2735528..2746145
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VV93_RS12500 (VV93_v1c24780) | - | 2735841..2736764 (-) | 924 | WP_039554596.1 | ABC transporter ATP-binding protein | - |
| VV93_RS12505 (VV93_v1c24790) | - | 2736931..2738601 (-) | 1671 | WP_039554598.1 | SulP family inorganic anion transporter | - |
| VV93_RS12510 (VV93_v1c24800) | can | 2738843..2739511 (+) | 669 | WP_026060803.1 | carbonate dehydratase | - |
| VV93_RS12515 (VV93_v1c24810) | hpt | 2739606..2740136 (-) | 531 | WP_011079559.1 | hypoxanthine phosphoribosyltransferase | - |
| VV93_RS12520 (VV93_v1c24820) | opaR | 2740528..2741145 (+) | 618 | WP_011079558.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| VV93_RS12525 (VV93_v1c24830) | lpdA | 2741277..2742704 (-) | 1428 | WP_011079557.1 | dihydrolipoyl dehydrogenase | - |
| VV93_RS12530 (VV93_v1c24840) | aceF | 2742962..2744854 (-) | 1893 | WP_039554600.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23717.02 Da Isoelectric Point: 6.1461
>NTDB_id=127810 VV93_RS12520 WP_011079558.1 2740528..2741145(+) (opaR) [Vibrio vulnificus strain 93U204]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
Nucleotide
Download Length: 618 bp
>NTDB_id=127810 VV93_RS12520 WP_011079558.1 2740528..2741145(+) (opaR) [Vibrio vulnificus strain 93U204]
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACCCGCGAAGATCTTGTAGACGAAGTGCTTAACCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCCATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGATGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAATTGCTGGTACAAAACATGTTCATCAAAGCCATTGAGCGTGGTGAAGTGTGTGACCAACACAACCCAGAA
GATTTGGCGAACTTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGTACCAACAATACCGCAGAGCTCAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAGCACGAATAG
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACCCGCGAAGATCTTGTAGACGAAGTGCTTAACCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCCATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGATGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAATTGCTGGTACAAAACATGTTCATCAAAGCCATTGAGCGTGGTGAAGTGTGTGACCAACACAACCCAGAA
GATTTGGCGAACTTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGTACCAACAATACCGCAGAGCTCAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAGCACGAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
92.157 |
99.512 |
0.917 |
| hapR | Vibrio cholerae C6706 |
72.864 |
97.073 |
0.707 |
| hapR | Vibrio cholerae strain A1552 |
72.864 |
97.073 |
0.707 |