Detailed information NTG0127409

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: NJ8700_RS07290
• Genome accession: NZ_CP009230
• Coordinates: 1584343..1585458 (+)
• Length: 371 a.a.
• NCBI ID: WP_012771759.1
• Uniprot ID: -
• Organism: Aggregatibacter aphrophilus NJ8700
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1579343..1590458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NJ8700_RS07265 (NJ8700_07435)	lexA	1581909..1582535 (+)	627	WP_012771757.1	transcriptional repressor LexA	-
NJ8700_RS07270 (NJ8700_07440)	rpsF	1582688..1583065 (+)	378	WP_005555822.1	30S ribosomal protein S6	-
NJ8700_RS07275 (NJ8700_07445)	priB	1583052..1583378 (+)	327	WP_005702288.1	primosomal replication protein N	-
NJ8700_RS07280 (NJ8700_07450)	rpsR	1583391..1583621 (+)	231	WP_005541294.1	30S ribosomal protein S18	-
NJ8700_RS07285 (NJ8700_07455)	rplI	1583637..1584086 (+)	450	WP_005702287.1	50S ribosomal protein L9	-
NJ8700_RS07290 (NJ8700_07460)	dprA	1584343..1585458 (+)	1116	WP_012771759.1	DNA-processing protein DprA	Machinery gene
NJ8700_RS07295 (NJ8700_07465)	rpsL	1585944..1586318 (+)	375	WP_005543325.1	30S ribosomal protein S12	-
NJ8700_RS07300 (NJ8700_07470)	rpsG	1586472..1586942 (+)	471	WP_005702285.1	30S ribosomal protein S7	-
NJ8700_RS07305 (NJ8700_07475)	fusA	1587059..1589161 (+)	2103	WP_005702284.1	elongation factor G	-
NJ8700_RS07310 (NJ8700_07480)	tuf	1589225..1590409 (+)	1185	WP_005702465.1	elongation factor Tu	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 41623.73 Da
• Isoelectric Point: 6.0394

>NTDB_id=127409 NJ8700_RS07290 WP_012771759.1 1584343..1585458(+) (dprA) [Aggregatibacter aphrophilus NJ8700]
MNNHPELLLRLLQIPKLGPTTIHKILAQVNLTELQNYDAVAFRQMGWSAQQIQAWFHPEMRYIEPALLWGEKEGNIILDY
FHPNYPELLKQIESAPPVLFVKGNCSALSQQQIAIVGSRQCSNYGEYWAKYFATELTTNGFIITSGLALGIDGFCHQAAV
DLNQPTIAVLGSGLEEIYPTKHRKLAQEIIANNGALVSEFFPLQPPVAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQNREIFALPGNIQSQFSQGCHKLIKQGAMLVENIEDILENLSPSPIWKKRPQNLPHFTSRTTTHTQLPEPVTPSY
PQLYDTIGYSPISIDNLVAKLGLSVDQLLTQLLELELQDLIISENGLYRRS

Nucleotide

• Length: 1116 bp

>NTDB_id=127409 NJ8700_RS07290 WP_012771759.1 1584343..1585458(+) (dprA) [Aggregatibacter aphrophilus NJ8700]
ATGAATAATCATCCGGAACTTTTATTACGTCTATTGCAAATTCCCAAACTGGGACCAACCACAATTCATAAAATCCTGGC
TCAAGTAAATTTAACGGAATTGCAAAATTACGACGCTGTCGCTTTTCGTCAAATGGGATGGAGCGCTCAACAAATACAGG
CCTGGTTTCACCCTGAAATGCGTTATATCGAGCCGGCATTGTTATGGGGTGAAAAAGAAGGCAACATAATTCTGGATTAT
TTCCACCCGAACTATCCTGAACTACTCAAACAAATCGAAAGTGCGCCGCCTGTGTTATTTGTAAAAGGAAACTGTTCGGC
ACTATCACAACAACAAATTGCCATTGTCGGCAGTCGCCAATGTTCTAACTATGGAGAATACTGGGCAAAATATTTTGCCA
CCGAACTGACTACCAATGGCTTTATTATCACCAGTGGCTTAGCATTAGGCATTGACGGATTTTGTCATCAAGCAGCCGTA
GATTTAAATCAACCGACTATTGCGGTTTTAGGTAGCGGATTAGAAGAAATTTACCCCACCAAACACCGCAAGCTGGCACA
AGAAATTATCGCTAACAATGGCGCATTAGTTTCTGAATTCTTCCCATTGCAACCACCGGTGGCAGAAAACTTTCCACGTC
GCAACCGCATTATTAGCGGCTTATCTTTAGCCACGTTAATTATTGAAGCAACGGAACGAAGCGGCTCTTTAATTACCGCT
CGTTACGCTTTAGAACAGAATCGGGAAATTTTTGCCTTGCCGGGGAATATTCAAAGTCAATTTAGCCAAGGCTGCCATAA
GTTAATAAAGCAAGGGGCAATGTTAGTCGAAAATATTGAGGATATTTTGGAAAATTTATCACCATCTCCGATATGGAAAA
AACGTCCGCAAAACTTACCGCACTTTACCTCCCGAACAACAACCCACACGCAGTTGCCGGAACCGGTTACGCCATCCTAT
CCGCAACTTTACGACACAATTGGCTATAGTCCCATTAGCATTGATAATTTAGTGGCGAAGCTGGGGTTATCGGTAGATCA
GCTTCTCACCCAATTATTAGAATTGGAATTGCAGGATTTAATTATCAGTGAGAATGGATTGTATCGACGATCTTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (310-364)

• DNA recombination-mediator protein A (DNA_processg_A) (76-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	64.171	100	0.647
dprA	Glaesserella parasuis strain SC1401	54.108	95.148	0.515
dprA	Vibrio campbellii strain DS40M4	43.802	97.844	0.429
dprA	Vibrio cholerae strain A1552	42.896	98.652	0.423
dprA	Legionella pneumophila strain ERS1305867	39.946	100	0.402