Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | YQ19_RS02450 | Genome accession | NZ_CP011317 |
| Coordinates | 533277..533642 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain Carb01 63 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 528277..538642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YQ19_RS02420 (YQ19_02420) | pyrR | 528899..529411 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| YQ19_RS02425 (YQ19_02425) | ruvX | 529523..529957 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| YQ19_RS02430 (YQ19_02430) | - | 529957..530526 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| YQ19_RS02435 (YQ19_02435) | - | 530575..531468 (-) | 894 | WP_015649761.1 | energy transducer TonB | - |
| YQ19_RS02440 (YQ19_02440) | gshB | 531615..532568 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| YQ19_RS02445 (YQ19_02445) | pilG | 532823..533230 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| YQ19_RS02450 (YQ19_02450) | pilH | 533277..533642 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| YQ19_RS02455 (YQ19_02455) | - | 533693..534229 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| YQ19_RS02460 (YQ19_02460) | pilJ | 534314..536362 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| YQ19_RS02465 (YQ19_02465) | pilK | 536423..537298 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=126882 YQ19_RS02450 WP_003084587.1 533277..533642(+) (pilH) [Pseudomonas aeruginosa strain Carb01 63]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=126882 YQ19_RS02450 WP_003084587.1 533277..533642(+) (pilH) [Pseudomonas aeruginosa strain Carb01 63]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGATGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGATGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |