Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ID12_RS00550 Genome accession   NZ_CP009108
Coordinates   95510..97816 (-) Length   768 a.a.
NCBI ID   WP_017358942.1    Uniprot ID   -
Organism   Bacillus altitudinis strain GR-8     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 90510..102816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ID12_RS00510 (ID12_00535) - 90916..91347 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  ID12_RS00515 (ID12_00540) - 91347..91688 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  ID12_RS00520 (ID12_00545) - 91681..93159 (+) 1479 WP_019744043.1 Na+/H+ antiporter subunit D -
  ID12_RS00525 (ID12_00550) - 93166..93645 (+) 480 WP_017358944.1 Na+/H+ antiporter subunit E -
  ID12_RS00530 (ID12_00555) - 93645..93926 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  ID12_RS00535 (ID12_00560) mnhG 93910..94284 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  ID12_RS00540 (ID12_00565) - 94375..94764 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  ID12_RS00545 (ID12_00570) comA 94788..95429 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  ID12_RS00550 (ID12_00575) comP 95510..97816 (-) 2307 WP_017358942.1 ATP-binding protein Regulator
  ID12_RS00555 (ID12_00580) comX 97830..98000 (-) 171 WP_017358941.1 competence pheromone ComX -
  ID12_RS00560 (ID12_00585) - 97978..98901 (-) 924 WP_017358940.1 polyprenyl synthetase family protein -
  ID12_RS00565 (ID12_00590) degQ 99053..99193 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  ID12_RS00570 (ID12_00595) - 99699..100055 (+) 357 WP_050826564.1 hypothetical protein -
  ID12_RS00575 (ID12_00600) - 100092..101318 (-) 1227 WP_050826565.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88578.24 Da        Isoelectric Point: 8.2943

>NTDB_id=126832 ID12_RS00550 WP_017358942.1 95510..97816(-) (comP) [Bacillus altitudinis strain GR-8]
MRKFYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKENSHGQLEVVDVDNFTDSYLAGVRKGDIILEVNGNKKPVEEV
KRGFLANVKSLVVDRHGDKIDLENVRLLSQANLFIYLIPVILYSICLFCIFMILKMNKANQKESAYILALFLLAVSIGYV
SSGGSGKGEAISRILVIVTMNIVPPLYMHFMYQYLKELGTEIIRRRVLFYLYLVPVTNVLLVLFYKNKAGPVDLLAYVNL
LSFFVLAFLSIIITIRAAKKLKDNEVSNVLRAFALILISAFSPFMLFFIIPYFFGIYFISPYVVASFVLLIPFFLVYQFM
SNKLYNVDFFMGRIKYYGFLAITPTILVVVLFDFIQKPNANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNY
QDSIFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIVEIDESIEESQLWKDYVDQFQDILGEVGKIIG
LDKGFMMKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMF
AMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDLGL
VKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDDGV
GFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=126832 ID12_RS00550 WP_017358942.1 95510..97816(-) (comP) [Bacillus altitudinis strain GR-8]
ATGAGAAAGTTTTACTCTAAGTTAACAGTTATATTAGTTATCCTTAGCTTCATCTATGTGATTTACATCTCTTATATCAA
CGTATTTAATATTTTTGTTGGAGCAGCTGTTAAGGAAAATAGTCACGGTCAACTTGAGGTAGTGGATGTCGATAATTTTA
CAGATAGCTATCTAGCTGGAGTTAGGAAAGGCGATATCATACTTGAAGTGAATGGGAATAAAAAACCAGTTGAAGAAGTT
AAAAGAGGTTTTTTAGCTAATGTTAAAAGTTTAGTCGTTGATAGACATGGTGATAAAATTGATTTAGAGAATGTAAGGTT
ATTGAGTCAAGCGAATCTGTTTATTTATCTAATACCAGTCATTCTTTATTCCATCTGTCTATTTTGTATATTTATGATTT
TAAAAATGAATAAAGCAAACCAAAAAGAGTCAGCTTATATTTTAGCTTTATTTCTTTTGGCGGTGTCTATAGGTTATGTA
AGTTCTGGTGGTTCTGGAAAAGGAGAGGCTATCAGTCGTATTCTTGTAATCGTTACAATGAATATTGTACCTCCACTATA
TATGCACTTTATGTATCAATATTTAAAAGAATTAGGAACAGAAATTATTCGTCGTCGAGTTCTTTTTTATTTGTATCTAG
TTCCAGTGACTAACGTTTTATTAGTTTTATTCTATAAAAATAAAGCAGGACCAGTAGATCTATTAGCATATGTCAATTTA
CTTTCATTTTTTGTTCTGGCTTTCCTTTCGATTATTATCACTATAAGGGCTGCTAAAAAATTGAAAGACAATGAAGTCAG
CAATGTACTTCGAGCATTTGCACTCATTTTAATCTCAGCATTCAGTCCATTCATGCTATTTTTTATCATTCCTTATTTTT
TTGGTATATATTTTATTTCACCGTATGTTGTTGCATCGTTTGTTCTTTTAATTCCTTTTTTCTTAGTCTATCAATTTATG
TCAAATAAGCTATATAATGTTGATTTCTTTATGGGAAGGATTAAATACTACGGTTTTTTAGCAATTACACCAACAATACT
AGTGGTTGTTCTTTTTGATTTTATTCAAAAGCCAAATGCAAATTTCTATACAGTGAAATTTACGATTATCACGTACATTC
TTATGCTTACCGTCTTCTACTTTAAAGAAATTATCGATTTCCGTTTTCGATTGAAGCGTTTTTCAGAGAAGCATAATTAT
CAGGATAGTATATTTAAATTCACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTATTGTATCATTTAAAATACAC
CATCTTAGAAGTACTTGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAAATTGTTGAAATTGATGAAT
CAATAGAAGAAAGCCAGCTATGGAAAGATTATGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGTAAAATCATCGGG
TTGGATAAAGGATTCATGATGAAAATTGGTGAGCGGGGCGGTCACTCGTTTGTGATTTGCTGTTTATCTAATTTACGGAC
ACCTAAGCTGACCCGCGATGAAATTTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTTA
AGATCGAAGAACTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTCATGTTC
GCCATGGAAGAAAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACTGAAGAG
ACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCATGGAATG
AACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGATTTGGGGTTA
GTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCGCTTTGA
TAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTATCCAATGCGTTGAAGC
ATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGATGGAGTC
GGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGCTCTAAA
TGGAAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.292

100

0.499


Multiple sequence alignment