Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DP17_RS03155 | Genome accession | NZ_CP009046 |
| Coordinates | 668859..669254 (-) | Length | 131 a.a. |
| NCBI ID | WP_002457121.1 | Uniprot ID | A0A7H5C5S7 |
| Organism | Staphylococcus epidermidis strain SEI | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 663859..674254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DP17_RS03130 (DP17_634) | thiE | 664599..665237 (-) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
| DP17_RS03135 (DP17_635) | thiM | 665243..666031 (-) | 789 | WP_001829971.1 | hydroxyethylthiazole kinase | - |
| DP17_RS03140 (DP17_636) | thiD | 666024..666845 (-) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DP17_RS03145 (DP17_637) | tenA | 666838..667527 (-) | 690 | WP_001829894.1 | thiaminase II | - |
| DP17_RS03150 (DP17_638) | - | 667812..668471 (-) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| DP17_RS03155 (DP17_639) | ssb | 668859..669254 (-) | 396 | WP_002457121.1 | single-stranded DNA-binding protein | Machinery gene |
| DP17_RS03160 (DP17_640) | - | 669445..669885 (+) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| DP17_RS03165 (DP17_641) | fabZ | 670203..670640 (-) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| DP17_RS03170 (DP17_642) | murA | 670674..671939 (-) | 1266 | WP_001829978.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DP17_RS03175 (DP17_643) | - | 672049..672282 (-) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| DP17_RS03180 (DP17_644) | - | 672431..672835 (-) | 405 | WP_002447782.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15159.02 Da Isoelectric Point: 5.2661
>NTDB_id=126328 DP17_RS03155 WP_002457121.1 668859..669254(-) (ssb) [Staphylococcus epidermidis strain SEI]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=126328 DP17_RS03155 WP_002457121.1 668859..669254(-) (ssb) [Staphylococcus epidermidis strain SEI]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |