Detailed information
Bioinformatically predicted
Overview
| Name | recF | Type | Machinery gene |
| Locus tag | CUGBS08_RS10420 | Genome accession | NZ_CP010874 |
| Coordinates | 2045328..2046437 (+) | Length | 369 a.a. |
| NCBI ID | WP_000264870.1 | Uniprot ID | Q3JYE9 |
| Organism | Streptococcus agalactiae strain CU_GBS_08 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2040328..2051437
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUGBS08_RS10395 (CUGBS08_02101) | - | 2040700..2041539 (-) | 840 | WP_000181757.1 | energy-coupling factor ABC transporter ATP-binding protein | - |
| CUGBS08_RS10400 (CUGBS08_02102) | pgsA | 2041539..2042081 (-) | 543 | WP_000239224.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| CUGBS08_RS10405 (CUGBS08_02103) | yfmH | 2042204..2043487 (-) | 1284 | WP_000217765.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| CUGBS08_RS10410 (CUGBS08_02104) | yfmF | 2043489..2044733 (-) | 1245 | WP_000706190.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| CUGBS08_RS10415 (CUGBS08_02105) | yaaA | 2044972..2045325 (+) | 354 | WP_000384867.1 | S4 domain-containing protein YaaA | - |
| CUGBS08_RS10420 (CUGBS08_02106) | recF | 2045328..2046437 (+) | 1110 | WP_000264870.1 | DNA replication/repair protein RecF | Machinery gene |
| CUGBS08_RS10425 (CUGBS08_02107) | - | 2046449..2047315 (-) | 867 | WP_000398683.1 | GRP family sugar transporter | - |
| CUGBS08_RS10430 (CUGBS08_02108) | - | 2047371..2048033 (-) | 663 | WP_001871057.1 | helix-turn-helix domain-containing protein | - |
| CUGBS08_RS10435 (CUGBS08_02109) | guaB | 2048108..2049589 (-) | 1482 | WP_000073440.1 | IMP dehydrogenase | - |
| CUGBS08_RS10440 (CUGBS08_02110) | - | 2049746..2050231 (-) | 486 | WP_001034427.1 | arginine repressor | - |
| CUGBS08_RS10445 (CUGBS08_02111) | - | 2050241..2050921 (-) | 681 | WP_000628848.1 | Crp/Fnr family transcriptional regulator | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 42471.27 Da Isoelectric Point: 7.3132
>NTDB_id=124989 CUGBS08_RS10420 WP_000264870.1 2045328..2046437(+) (recF) [Streptococcus agalactiae strain CU_GBS_08]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD
Nucleotide
Download Length: 1110 bp
>NTDB_id=124989 CUGBS08_RS10420 WP_000264870.1 2045328..2046437(+) (recF) [Streptococcus agalactiae strain CU_GBS_08]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recF | Streptococcus pneumoniae R6 |
63.636 |
98.374 |
0.626 |
| recF | Bacillus subtilis subsp. subtilis str. 168 |
44.837 |
99.729 |
0.447 |