Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   TK78_RS19855 Genome accession   NZ_CP010833
Coordinates   4492958..4494082 (-) Length   374 a.a.
NCBI ID   WP_075265676.1    Uniprot ID   -
Organism   Streptomyces sp. Tue 6075 strain Tue6075     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4487958..4499082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TK78_RS19830 (TK78_19435) cseB 4488289..4489002 (-) 714 WP_075265672.1 two-component system response regulator CseB -
  TK78_RS19835 (TK78_19440) - 4489037..4489705 (-) 669 WP_075265673.1 hypothetical protein -
  TK78_RS19840 (TK78_19445) - 4489792..4490463 (-) 672 WP_075265674.1 SigE family RNA polymerase sigma factor -
  TK78_RS19845 (TK78_19450) - 4490624..4491538 (-) 915 WP_065485349.1 A/G-specific adenine glycosylase -
  TK78_RS19850 (TK78_19455) - 4491844..4492575 (+) 732 WP_075265675.1 hypothetical protein -
  TK78_RS19855 (TK78_19460) disA 4492958..4494082 (-) 1125 WP_075265676.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  TK78_RS19860 (TK78_19465) radA/sms 4494163..4495575 (-) 1413 WP_075265677.1 DNA repair protein RadA Machinery gene
  TK78_RS19865 (TK78_19470) - 4495769..4497760 (+) 1992 WP_075265678.1 hypothetical protein -
  TK78_RS19870 (TK78_19475) - 4497855..4498718 (-) 864 WP_075265679.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40384.30 Da        Isoelectric Point: 4.9406

>NTDB_id=124744 TK78_RS19855 WP_075265676.1 4492958..4494082(-) (disA) [Streptomyces sp. Tue 6075 strain Tue6075]
MAANDRATTPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIAVYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVGEALTELDSLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=124744 TK78_RS19855 WP_075265676.1 4492958..4494082(-) (disA) [Streptomyces sp. Tue 6075 strain Tue6075]
GTGGCAGCCAACGACCGGGCGACGACGCCCGGAAAGTCCGGCCAAGGCACCGGCAACGAGGCGCTGATGCGCGCCTCGCT
GAGCGCGGTCGCGCCCGGTATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAATACCGGTGGCCTGATCGTGC
TGGGCATGGACCGGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCGTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGGTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGGGCCAATCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGCCTGGAGATGGTGCGGCGGATCG
CCACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGCCGGCTGCTCTCGCTCCAGCTGGACGAGCTGATCGCG
GGGGTGGAGCCGGAGCGGGAGCTGGTCGTGCGGGACTATGTCCCCGAGCCGACGGCGAAACGGTCGCGCACGGTGGGCGA
GGCGCTGACCGAGCTGGACTCCCTGAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GTTCGCCGGAGACGCTGGACTCGGCGGTGTCCCCGCGGGGGTTCCGGTTGCTGGCGAAGGTGCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGGCTTCAGAAGTTGCTGGCTGCGAGCGTGGACGATCTCCAGACCGTCGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGTGTTCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433


Multiple sequence alignment