Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GT95_RS02155 Genome accession   NZ_CP008813
Coordinates   367741..368466 (+) Length   241 a.a.
NCBI ID   WP_000912307.1    Uniprot ID   A0AAV3JGZ9
Organism   Streptococcus agalactiae strain C001     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 362741..373466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GT95_RS02120 (GT95_02040) tsaE 363543..363986 (+) 444 WP_032459127.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GT95_RS02125 (GT95_02045) - 363979..364500 (+) 522 WP_017647017.1 GNAT family N-acetyltransferase -
  GT95_RS02130 (GT95_02050) - 364509..365816 (+) 1308 WP_000708160.1 LCP family protein -
  GT95_RS02135 (GT95_02055) - 365880..366176 (-) 297 WP_017647018.1 hypothetical protein -
  GT95_RS02140 (GT95_02060) - 366173..366592 (-) 420 WP_017647019.1 HIT family protein -
  GT95_RS02145 (GT95_02065) - 366928..367431 (+) 504 WP_017647020.1 hypothetical protein -
  GT95_RS02150 - 367483..367669 (-) 187 Protein_346 hypothetical protein -
  GT95_RS02155 (GT95_02070) pptA 367741..368466 (+) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  GT95_RS02160 (GT95_02075) pptB 368468..369502 (+) 1035 WP_017647021.1 ABC transporter permease Regulator
  GT95_RS02165 (GT95_02080) ccrZ 369560..370360 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  GT95_RS02170 (GT95_02085) trmB 370350..370985 (+) 636 WP_017647022.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GT95_RS02180 (GT95_02095) rimP 371476..371952 (+) 477 WP_047210184.1 ribosome maturation factor RimP -
  GT95_RS02185 (GT95_02100) nusA 371988..373139 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  GT95_RS02190 (GT95_02105) - 373161..373457 (+) 297 WP_001140526.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26835.26 Da        Isoelectric Point: 4.5704

>NTDB_id=124412 GT95_RS02155 WP_000912307.1 367741..368466(+) (pptA) [Streptococcus agalactiae strain C001]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=124412 GT95_RS02155 WP_000912307.1 367741..368466(+) (pptA) [Streptococcus agalactiae strain C001]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAAACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772
  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768

Multiple sequence alignment