Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | GT95_RS01090 | Genome accession | NZ_CP008813 |
| Coordinates | 186233..187207 (+) | Length | 324 a.a. |
| NCBI ID | WP_001008568.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain C001 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 181233..192207
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GT95_RS01045 (GT95_01020) | - | 181924..182289 (+) | 366 | WP_000285373.1 | DUF1033 family protein | - |
| GT95_RS01055 (GT95_01025) | comYA | 182461..183432 (+) | 972 | WP_069107363.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GT95_RS01060 (GT95_01030) | comYB | 183326..184369 (+) | 1044 | WP_228322108.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GT95_RS01065 (GT95_01035) | comGC/cglC | 184366..184695 (+) | 330 | WP_000793380.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GT95_RS01070 (GT95_01040) | comYD | 184670..185083 (+) | 414 | WP_017646959.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GT95_RS01075 (GT95_01045) | comGE | 185055..185354 (+) | 300 | WP_025195478.1 | competence type IV pilus minor pilin ComGE | - |
| GT95_RS01080 (GT95_01050) | comGF | 185308..185769 (+) | 462 | WP_001874060.1 | competence type IV pilus minor pilin ComGF | - |
| GT95_RS01085 (GT95_01055) | comGG | 185747..186118 (+) | 372 | WP_000601103.1 | competence type IV pilus minor pilin ComGG | - |
| GT95_RS01090 (GT95_01060) | comYH | 186233..187207 (+) | 975 | WP_001008568.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GT95_RS01095 (GT95_01065) | - | 187239..188432 (+) | 1194 | WP_000047537.1 | acetate kinase | - |
| GT95_RS01100 (GT95_01070) | - | 188584..188790 (+) | 207 | WP_000798241.1 | helix-turn-helix transcriptional regulator | - |
| GT95_RS01105 | - | 188849..188986 (+) | 138 | WP_079263416.1 | hypothetical protein | - |
| GT95_RS01110 (GT95_01075) | - | 189089..189481 (+) | 393 | WP_001265365.1 | hypothetical protein | - |
| GT95_RS01115 (GT95_01080) | - | 189550..190215 (+) | 666 | WP_000008107.1 | type II CAAX endopeptidase family protein | - |
| GT95_RS01120 (GT95_01085) | proC | 190236..191006 (-) | 771 | WP_001867096.1 | pyrroline-5-carboxylate reductase | - |
| GT95_RS01125 (GT95_01090) | pepA | 191076..192143 (-) | 1068 | WP_001281326.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37200.19 Da Isoelectric Point: 4.4491
>NTDB_id=124406 GT95_RS01090 WP_001008568.1 186233..187207(+) (comYH) [Streptococcus agalactiae strain C001]
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGCS
VQFIQEDAVRPQILKESDVIISDLPVGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWRRENSHYSK
NMIE
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGCS
VQFIQEDAVRPQILKESDVIISDLPVGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWRRENSHYSK
NMIE
Nucleotide
Download Length: 975 bp
>NTDB_id=124406 GT95_RS01090 WP_001008568.1 186233..187207(+) (comYH) [Streptococcus agalactiae strain C001]
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAATCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTGTAGT
GTCCAATTTATCCAAGAGGATGCTGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGAAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAATCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTGTAGT
GTCCAATTTATCCAAGAGGATGCTGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGAAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
67.302 |
97.222 |
0.654 |
| comYH | Streptococcus mutans UA140 |
67.302 |
97.222 |
0.654 |