Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | MTVDSCJ20_RS02465 | Genome accession | NZ_CP008787 |
| Coordinates | 464744..465397 (-) | Length | 217 a.a. |
| NCBI ID | WP_038402199.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni subsp. jejuni strain MTVDSCj20 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 453533..481025 | 464744..465397 | within | 0 |
Gene organization within MGE regions
Location: 453533..481025
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MTVDSCJ20_RS02370 (MTVDSCj20_0462) | - | 453533..454735 (+) | 1203 | WP_038402048.1 | site-specific integrase | - |
| MTVDSCJ20_RS02375 (MTVDSCj20_0463) | - | 454732..454902 (-) | 171 | WP_002864902.1 | helix-turn-helix domain-containing protein | - |
| MTVDSCJ20_RS02380 (MTVDSCj20_0464) | - | 454895..455437 (-) | 543 | WP_038402049.1 | pentapeptide repeat-containing protein | - |
| MTVDSCJ20_RS02385 (MTVDSCj20_0465) | - | 455585..456226 (-) | 642 | WP_144242044.1 | hypothetical protein | - |
| MTVDSCJ20_RS02390 (MTVDSCj20_0466) | - | 456232..456582 (-) | 351 | WP_002875041.1 | hypothetical protein | - |
| MTVDSCJ20_RS02395 (MTVDSCj20_0467) | - | 456585..457253 (-) | 669 | WP_038402051.1 | antA/AntB antirepressor family protein | - |
| MTVDSCJ20_RS02400 (MTVDSCj20_0468) | - | 457389..457784 (-) | 396 | WP_032582844.1 | hypothetical protein | - |
| MTVDSCJ20_RS02405 (MTVDSCj20_0469) | - | 457828..458580 (-) | 753 | WP_038402052.1 | site-specific DNA-methyltransferase | - |
| MTVDSCJ20_RS02410 (MTVDSCj20_0470) | - | 458561..459001 (-) | 441 | WP_038402054.1 | DUF3310 domain-containing protein | - |
| MTVDSCJ20_RS02415 (MTVDSCj20_0471) | - | 459004..459255 (-) | 252 | WP_038402055.1 | hypothetical protein | - |
| MTVDSCJ20_RS02420 (MTVDSCj20_0472) | - | 459245..459508 (-) | 264 | WP_038402057.1 | hypothetical protein | - |
| MTVDSCJ20_RS02425 (MTVDSCj20_0473) | - | 459489..460183 (-) | 695 | Protein_462 | hypothetical protein | - |
| MTVDSCJ20_RS02430 (MTVDSCj20_0474) | - | 460183..461115 (-) | 933 | WP_038402058.1 | recombinase RecT | - |
| MTVDSCJ20_RS02435 (MTVDSCj20_0475) | - | 461117..461971 (-) | 855 | WP_038402060.1 | lambda-exonuclease family protein | - |
| MTVDSCJ20_RS02440 (MTVDSCj20_0476) | - | 461973..462200 (-) | 228 | WP_038402062.1 | helix-turn-helix domain-containing protein | - |
| MTVDSCJ20_RS02445 (MTVDSCj20_0477) | - | 462191..462448 (-) | 258 | WP_038402064.1 | hypothetical protein | - |
| MTVDSCJ20_RS02450 (MTVDSCj20_0478) | - | 462439..462708 (-) | 270 | WP_022552238.1 | hypothetical protein | - |
| MTVDSCJ20_RS02455 (MTVDSCj20_0479) | - | 463269..463541 (-) | 273 | WP_038402065.1 | hypothetical protein | - |
| MTVDSCJ20_RS02460 (MTVDSCj20_0480) | - | 463720..464490 (+) | 771 | WP_002875052.1 | SEL1-like repeat protein | - |
| MTVDSCJ20_RS02465 (MTVDSCj20_0482) | CJE0566 | 464744..465397 (-) | 654 | WP_038402199.1 | DNA/RNA non-specific endonuclease | Regulator |
| MTVDSCJ20_RS02470 (MTVDSCj20_0483) | - | 465417..466190 (-) | 774 | WP_002929400.1 | hypothetical protein | - |
| MTVDSCJ20_RS02475 (MTVDSCj20_0484) | - | 466187..466918 (-) | 732 | WP_002929403.1 | S24 family peptidase | - |
| MTVDSCJ20_RS02480 (MTVDSCj20_0485) | - | 467059..467274 (+) | 216 | WP_002925661.1 | hypothetical protein | - |
| MTVDSCJ20_RS08755 | - | 467297..467623 (-) | 327 | WP_032599246.1 | hypothetical protein | - |
| MTVDSCJ20_RS02490 (MTVDSCj20_0487) | - | 467666..468667 (+) | 1002 | WP_038402068.1 | hypothetical protein | - |
| MTVDSCJ20_RS02495 (MTVDSCj20_0488) | - | 468678..469328 (+) | 651 | WP_038402069.1 | hypothetical protein | - |
| MTVDSCJ20_RS02500 (MTVDSCj20_0489) | - | 469346..469726 (+) | 381 | WP_002871223.1 | hypothetical protein | - |
| MTVDSCJ20_RS02505 (MTVDSCj20_0490) | - | 469726..470112 (+) | 387 | WP_002861661.1 | terminase small subunit | - |
| MTVDSCJ20_RS02510 (MTVDSCj20_0491) | - | 470109..471401 (+) | 1293 | WP_038402071.1 | terminase | - |
| MTVDSCJ20_RS02515 (MTVDSCj20_0492) | - | 471391..471663 (+) | 273 | WP_038402073.1 | hypothetical protein | - |
| MTVDSCJ20_RS02520 (MTVDSCj20_0493) | - | 471644..473182 (+) | 1539 | WP_038402074.1 | hypothetical protein | - |
| MTVDSCJ20_RS02525 (MTVDSCj20_0494) | - | 473175..473378 (+) | 204 | WP_000931940.1 | hypothetical protein | - |
| MTVDSCJ20_RS02530 (MTVDSCj20_0495) | - | 473368..474015 (+) | 648 | WP_002865492.1 | hypothetical protein | - |
| MTVDSCJ20_RS02535 (MTVDSCj20_0496) | - | 474026..474406 (+) | 381 | WP_002861666.1 | hypothetical protein | - |
| MTVDSCJ20_RS02540 (MTVDSCj20_0497) | - | 474671..475882 (+) | 1212 | WP_038402075.1 | hypothetical protein | - |
| MTVDSCJ20_RS02545 (MTVDSCj20_0498) | - | 475882..479583 (+) | 3702 | WP_038402076.1 | PBECR2 nuclease fold domain-containing protein | - |
| MTVDSCJ20_RS02550 (MTVDSCj20_0499) | - | 479991..481025 (+) | 1035 | WP_038402077.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25534.07 Da Isoelectric Point: 9.8338
>NTDB_id=124242 MTVDSCJ20_RS02465 WP_038402199.1 464744..465397(-) (CJE0566) [Campylobacter jejuni subsp. jejuni strain MTVDSCj20]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHALSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHEVDDEGIKKYKVNCDKF
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHALSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHEVDDEGIKKYKVNCDKF
Nucleotide
Download Length: 654 bp
>NTDB_id=124242 MTVDSCJ20_RS02465 WP_038402199.1 464744..465397(-) (CJE0566) [Campylobacter jejuni subsp. jejuni strain MTVDSCj20]
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCAAGATTTGAA
GATGATACAAATATCCCTAAAAAATATCGCACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACGCTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGTAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAACCATGAAGTGGATGACGAGGGTATAAAAAAATATAAGGTTAATT
GTGATAAATTTTAG
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCAAGATTTGAA
GATGATACAAATATCCCTAAAAAATATCGCACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACGCTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGTAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAACCATGAAGTGGATGACGAGGGTATAAAAAAATATAAGGTTAATT
GTGATAAATTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
93.088 |
100 |
0.931 |
| CJE1441 | Campylobacter jejuni RM1221 |
90.323 |
100 |
0.903 |