Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Machinery gene
Locus tag   C645_RS05720 Genome accession   NZ_CP008740
Coordinates   1112459..1112746 (+) Length   95 a.a.
NCBI ID   WP_005655928.1    Uniprot ID   A0A0H3PGC3
Organism   Haemophilus influenzae 2019     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1107459..1117746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C645_RS05695 (C645_05775) nrfE 1107522..1109429 (-) 1908 WP_046067701.1 heme lyase NrfEFG subunit NrfE -
  C645_RS05700 (C645_05780) suhB 1109537..1110340 (-) 804 WP_046067702.1 inositol-1-monophosphatase -
  C645_RS05705 (C645_05785) comN 1110540..1111052 (+) 513 WP_005688386.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  C645_RS05710 (C645_05790) comO 1111052..1111768 (+) 717 WP_005688385.1 type II secretion system protein J Machinery gene
  C645_RS05715 (C645_05795) comP 1111783..1112466 (+) 684 WP_005655925.1 DUF2572 family protein Machinery gene
  C645_RS05720 (C645_05800) comQ 1112459..1112746 (+) 288 WP_005655928.1 DUF5374 domain-containing protein Machinery gene
  C645_RS05725 (C645_05805) recC 1112792..1116172 (+) 3381 WP_046067703.1 exodeoxyribonuclease V subunit gamma -
  C645_RS05730 (C645_05810) nrdR 1116227..1116676 (+) 450 WP_005688384.1 transcriptional regulator NrdR -

Sequence

Protein


Download         Length: 95 a.a.        Molecular weight: 11033.81 Da        Isoelectric Point: 9.2205

>NTDB_id=123971 C645_RS05720 WP_005655928.1 1112459..1112746(+) (comQ) [Haemophilus influenzae 2019]
MNKGISFITLLFSLTLFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ

Nucleotide


Download         Length: 288 bp        

>NTDB_id=123971 C645_RS05720 WP_005655928.1 1112459..1112746(+) (comQ) [Haemophilus influenzae 2019]
ATGAATAAAGGAATATCTTTTATTACATTGTTATTTTCTTTAACTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA

Domains

Predicted by InterproScan.

Family of unknown function (DUF5374) (DUF5374)

(53-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3PGC3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Haemophilus influenzae Rd KW20

95.789

100

0.958

Multiple sequence alignment