Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABUW_RS10945 | Genome accession | NZ_CP008706 |
| Coordinates | 2238705..2239085 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain AB5075-UW | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2233705..2244085
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUW_RS10915 (ABUW_2245) | tadA | 2233824..2234327 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| ABUW_RS10920 (ABUW_2246) | - | 2234334..2235458 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABUW_RS10925 (ABUW_2247) | ung | 2235455..2236168 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ABUW_RS10930 (ABUW_2248) | - | 2236219..2236815 (-) | 597 | WP_000908449.1 | 6-carboxytetrahydropterin synthase | - |
| ABUW_RS10935 (ABUW_2249) | gspK | 2237045..2238004 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| ABUW_RS10940 (ABUW_2250) | xcpW | 2238004..2238705 (-) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABUW_RS10945 (ABUW_2251) | xcpV | 2238705..2239085 (-) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABUW_RS10950 (ABUW_2252) | - | 2239075..2239629 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABUW_RS10955 (ABUW_2253) | - | 2239639..2240247 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABUW_RS10960 (ABUW_2254) | - | 2240285..2241058 (-) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| ABUW_RS10965 (ABUW_2255) | - | 2241076..2241417 (-) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| ABUW_RS10970 (ABUW_2256) | - | 2241429..2242409 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ABUW_RS10975 (ABUW_2257) | kdsB | 2242421..2243182 (-) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=123786 ABUW_RS10945 WP_000836914.1 2238705..2239085(-) (xcpV) [Acinetobacter baumannii strain AB5075-UW]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=123786 ABUW_RS10945 WP_000836914.1 2238705..2239085(-) (xcpV) [Acinetobacter baumannii strain AB5075-UW]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |