Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FE90_RS07250 Genome accession   NZ_CP008695
Coordinates   1429783..1430592 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M23ND     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1424783..1435592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FE90_RS07240 (FE90_1454) smc 1425108..1428647 (-) 3540 WP_038433653.1 chromosome segregation protein SMC -
  FE90_RS07245 (FE90_1455) rnc 1428648..1429340 (-) 693 WP_002985639.1 ribonuclease III -
  FE90_RS07250 (FE90_1456) vicX 1429783..1430592 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  FE90_RS07255 (FE90_1457) vicK 1430596..1431948 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FE90_RS07260 (FE90_1458) vicR 1431941..1432651 (-) 711 WP_002985645.1 response regulator YycF Regulator
  FE90_RS07265 (FE90_1459) - 1432813..1433847 (-) 1035 WP_011184290.1 DUF3114 domain-containing protein -
  FE90_RS07270 (FE90_1460) - 1433903..1435150 (-) 1248 WP_038433654.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=123599 FE90_RS07250 WP_002985641.1 1429783..1430592(-) (vicX) [Streptococcus pyogenes strain M23ND]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=123599 FE90_RS07250 WP_002985641.1 1429783..1430592(-) (vicX) [Streptococcus pyogenes strain M23ND]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAATCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment