Detailed information NTG0123175

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CAQ16704_RS06240
• Genome accession: NZ_CP007769
• Coordinates: 1223701..1224615 (-)
• Length: 304 a.a.
• NCBI ID: WP_039667377.1
• Uniprot ID: A0A0A8GY37
• Organism: Campylobacter sp. RM16704
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1218701..1229615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAQ16704_RS06215 (CAQ16704_1242)	mgtE	1219039..1220382 (+)	1344	WP_039667372.1	magnesium transporter	-
CAQ16704_RS06220 (CAQ16704_1243)	tpx	1220395..1220913 (+)	519	WP_039667373.1	thiol peroxidase	-
CAQ16704_RS06225 (CAQ16704_1244)	-	1220910..1222295 (-)	1386	WP_039667374.1	replicative DNA helicase	-
CAQ16704_RS06230 (CAQ16704_1245)	cysK	1222308..1223210 (-)	903	WP_039667375.1	cysteine synthase A	-
CAQ16704_RS06235 (CAQ16704_1246)	-	1223307..1223609 (-)	303	WP_039667376.1	HU family DNA-binding protein	-
CAQ16704_RS06240 (CAQ16704_1247)	waaF	1223701..1224615 (-)	915	WP_039667377.1	lipopolysaccharide heptosyltransferase II	Regulator
CAQ16704_RS06245 (CAQ16704_1248)	-	1224675..1225499 (+)	825	WP_039667378.1	glycosyltransferase family 2 protein	-
CAQ16704_RS06250 (CAQ16704_1249)	-	1225480..1226361 (+)	882	WP_039667379.1	TcdA/TcdB catalytic glycosyltransferase domain-containing protein	-
CAQ16704_RS06255 (CAQ16704_1250)	-	1226363..1227490 (-)	1128	WP_039667380.1	glycosyltransferase family 4 protein	-
CAQ16704_RS06260 (CAQ16704_1251)	-	1227556..1228500 (+)	945	WP_039667381.1	glycosyltransferase family 2 protein	-
CAQ16704_RS08375	-	1228493..1228606 (+)	114	WP_200884642.1	glycosyltransferase	-
CAQ16704_RS08185 (CAQ16704_1252)	-	1228702..1229046 (+)	345	WP_052245025.1	hypothetical protein	-

Sequence

Protein

• Length: 304 a.a.
• Molecular weight: 34608.85 Da
• Isoelectric Point: 10.1913

>NTDB_id=123175 CAQ16704_RS06240 WP_039667377.1 1223701..1224615(-) (waaF) [Campylobacter sp. RM16704]
MNIFINLPTWLGDAVMASAAIYAIKEKYPKAKFTFYGSFVSVGLYKHFKNSKVLVENKKQRFSQILKARAMLGEFDLAFS
FRSAFSSKIILKLIKTKKRFCFNKEILKEEHQVLKYLNFIEKSLDFKANSNDLKLPIKAKTTRKILGINAGAHFGSAKRW
ETDYFAEVAKAFSSTHQILIFGVESEREICEEIYNMLLNEGIKVKNLCGKTSIFTLCKNISMLDLLITNDSGPMHIGAAY
GVKTVAIFGSTRFNQTSPWQENAKIAHLDLACMPCMQKKCPLEHHKCMKDLKPKIVINLAKTFF

Nucleotide

• Length: 915 bp

>NTDB_id=123175 CAQ16704_RS06240 WP_039667377.1 1223701..1224615(-) (waaF) [Campylobacter sp. RM16704]
ATGAATATTTTTATTAATCTTCCTACATGGCTTGGTGATGCTGTTATGGCTAGTGCGGCTATTTATGCTATAAAAGAAAA
ATATCCTAAGGCTAAATTTACCTTTTATGGCTCATTTGTGAGTGTAGGACTTTATAAACATTTTAAAAATTCAAAAGTTT
TAGTAGAAAATAAAAAACAAAGATTCAGTCAAATTTTAAAGGCTAGAGCAATGCTCGGTGAATTTGATTTAGCATTTTCA
TTTCGCTCAGCATTTTCAAGTAAGATTATTTTAAAACTAATTAAAACAAAAAAAAGGTTTTGTTTTAATAAAGAGATTTT
AAAAGAGGAACATCAAGTTTTAAAATATTTAAATTTTATAGAAAAATCTTTAGACTTTAAAGCAAACTCAAATGATTTAA
AACTTCCTATCAAAGCAAAAACTACTCGAAAAATTCTAGGTATAAATGCAGGTGCACATTTTGGAAGTGCAAAAAGATGG
GAAACAGATTATTTTGCAGAAGTTGCAAAGGCGTTTAGTTCTACACATCAAATTTTAATTTTTGGGGTAGAAAGTGAAAG
AGAAATTTGTGAAGAAATTTATAATATGCTTTTAAATGAAGGTATTAAAGTTAAAAATCTTTGTGGAAAAACAAGTATTT
TTACTTTATGTAAAAATATTTCTATGCTTGATTTACTCATCACAAATGATAGCGGTCCTATGCATATAGGTGCAGCTTAT
GGGGTAAAAACGGTAGCTATTTTTGGTTCTACTAGATTTAATCAAACATCACCTTGGCAAGAAAATGCTAAAATAGCTCA
TCTTGATCTAGCTTGTATGCCTTGTATGCAAAAAAAATGCCCCTTAGAGCATCACAAATGTATGAAAGATTTAAAACCTA
AAATAGTTATAAATTTAGCAAAAACATTTTTTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (110-284)

3D structure

• AlphaFold DB: A0A0A8GY37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.057	100	0.651