Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   CAQ16704_RS04625 Genome accession   NZ_CP007769
Coordinates   893952..894608 (+) Length   218 a.a.
NCBI ID   WP_039667092.1    Uniprot ID   A0A0A8H0H5
Organism   Campylobacter sp. RM16704     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 888952..899608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAQ16704_RS04600 (CAQ16704_0917) - 889052..890572 (-) 1521 WP_039667087.1 inorganic phosphate transporter -
  CAQ16704_RS04605 (CAQ16704_0918) pdxA 890618..891718 (-) 1101 WP_039667088.1 4-hydroxythreonine-4-phosphate dehydrogenase -
  CAQ16704_RS04610 (CAQ16704_0919) - 891715..892482 (-) 768 WP_039667089.1 pyridoxine 5'-phosphate synthase -
  CAQ16704_RS04615 (CAQ16704_0920) - 892539..893501 (+) 963 WP_039667090.1 exopolyphosphatase, Ppx/GppA family -
  CAQ16704_RS04620 (CAQ16704_0921) - 893512..893955 (+) 444 WP_039667091.1 GatB/YqeY domain-containing protein -
  CAQ16704_RS04625 (CAQ16704_0922) CJE0566 893952..894608 (+) 657 WP_039667092.1 DNA/RNA endonuclease G Regulator
  CAQ16704_RS07985 (CAQ16704_0923) - 894680..897304 (+) 2625 WP_052245003.1 filamentous hemagglutinin N-terminal domain-containing protein -
  CAQ16704_RS04635 (CAQ16704_0924) dnaK 897328..899199 (-) 1872 WP_039667093.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 26081.11 Da        Isoelectric Point: 9.8636

>NTDB_id=123168 CAQ16704_RS04625 WP_039667092.1 893952..894608(+) (CJE0566) [Campylobacter sp. RM16704]
MKKILTLCAIALSSFAYTQYELHPSFKEYFKNCSLLMDKYYYINCYDYNYKGTKAIAYKLKASILNQGHIKKRPKFSEDT
NIPKKYRTYWEDYLRSGYTRGHVVPNQSMNATPQAQLSTFLMSNITPQKKDINAEIWNEIEQRERYLAKKNKELEVLNLV
LYDEKPKRIKNNIAIPSFYVKILKAKNYAECYKVPNNDNFARFDRNYFKEDCKKYIKY

Nucleotide


Download         Length: 657 bp        

>NTDB_id=123168 CAQ16704_RS04625 WP_039667092.1 893952..894608(+) (CJE0566) [Campylobacter sp. RM16704]
ATGAAAAAAATTTTAACGCTTTGTGCTATAGCTTTAAGCTCTTTTGCTTATACTCAATATGAACTACATCCTAGTTTTAA
AGAATACTTTAAAAATTGTTCTTTACTTATGGATAAATATTATTATATTAATTGTTATGATTATAATTATAAAGGCACTA
AAGCTATAGCTTATAAACTAAAAGCAAGTATTTTAAATCAAGGACACATCAAAAAACGCCCTAAATTTTCAGAAGATACA
AATATACCTAAAAAATACAGAACTTATTGGGAGGATTATCTAAGAAGTGGCTATACAAGAGGGCATGTTGTACCAAATCA
ATCCATGAATGCAACCCCGCAAGCTCAGCTTAGTACTTTTTTAATGAGTAATATCACTCCACAAAAAAAAGATATTAACG
CTGAAATTTGGAATGAAATCGAACAAAGAGAAAGATATTTAGCAAAGAAAAACAAAGAATTAGAAGTGCTAAATTTAGTT
CTTTATGATGAAAAACCAAAACGCATAAAAAACAACATCGCAATACCTAGTTTTTATGTAAAAATACTTAAAGCAAAAAA
CTATGCAGAATGTTATAAAGTTCCAAATAATGATAATTTTGCAAGATTTGATAGAAATTATTTTAAAGAAGATTGTAAAA
AATATATCAAGTATTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(36-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8H0H5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

57.604

99.541

0.573
  CJE1441 Campylobacter jejuni RM1221

61.194

92.202

0.564

Multiple sequence alignment