Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE1441   Type   Regulator
Locus tag   CPEL_RS05230 Genome accession   NZ_CP007766
Coordinates   1061932..1062588 (+) Length   218 a.a.
NCBI ID   WP_044598886.1    Uniprot ID   -
Organism   Campylobacter peloridis LMG 23910     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1056932..1067588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPEL_RS05205 (CPEL_1029) - 1057026..1058549 (-) 1524 WP_044598881.1 inorganic phosphate transporter -
  CPEL_RS05210 (CPEL_1030) pdxA 1058596..1059696 (-) 1101 WP_044598882.1 4-hydroxythreonine-4-phosphate dehydrogenase -
  CPEL_RS05215 (CPEL_1031) - 1059693..1060460 (-) 768 WP_044598883.1 pyridoxine 5'-phosphate synthase -
  CPEL_RS05220 (CPEL_1032) - 1060516..1061481 (+) 966 WP_044598884.1 exopolyphosphatase, Ppx/GppA family -
  CPEL_RS05225 (CPEL_1033) - 1061492..1061935 (+) 444 WP_044598885.1 GatB/YqeY domain-containing protein -
  CPEL_RS05230 (CPEL_1034) CJE1441 1061932..1062588 (+) 657 WP_044598886.1 DNA/RNA endonuclease G Regulator
  CPEL_RS08770 (CPEL_1035) - 1062654..1066061 (+) 3408 WP_049984587.1 filamentous hemagglutinin N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 26414.42 Da        Isoelectric Point: 9.7468

>NTDB_id=123150 CPEL_RS05230 WP_044598886.1 1061932..1062588(+) (CJE1441) [Campylobacter peloridis LMG 23910]
MKKILLLCFFVFNAFAYTQYELHPSFKKYFQECSLLMDKYYYINCYDYNYKGTKAIAYKLEAEILNQGHIKKRPRFSEDT
NIAKKYRTYWEDYLRSGYTRGHVVPNQSMNATKQAQLSTFLMSNITPQKKEINAKIWNEIEQRERYLAKKYKELEVLNLI
IYEQNPKRIKNNIAIPSFYVKILKAKNYTECYKVPNNDNFAEFNRNYFKQDCKNYINY

Nucleotide


Download         Length: 657 bp        

>NTDB_id=123150 CPEL_RS05230 WP_044598886.1 1061932..1062588(+) (CJE1441) [Campylobacter peloridis LMG 23910]
ATGAAAAAAATTTTATTGCTTTGCTTTTTTGTGTTTAATGCCTTTGCTTATACACAATATGAATTGCACCCTAGTTTTAA
AAAATACTTTCAAGAGTGCTCTTTGCTTATGGATAAGTATTATTATATCAATTGTTATGATTATAATTACAAAGGCACTA
AGGCTATAGCTTATAAACTAGAAGCTGAAATTTTAAATCAAGGCCATATCAAAAAACGCCCAAGATTTTCAGAAGATACA
AACATAGCTAAAAAATACCGCACTTACTGGGAGGATTATTTAAGAAGTGGGTATACAAGAGGGCATGTTGTGCCTAATCA
ATCCATGAATGCAACCAAGCAAGCTCAACTTAGCACTTTTTTAATGAGCAATATCACTCCACAAAAAAAAGAAATCAACG
CTAAAATTTGGAATGAAATCGAACAAAGAGAAAGGTATTTAGCAAAAAAATACAAAGAACTTGAAGTTTTAAATTTAATC
ATTTATGAACAAAATCCAAAACGCATAAAAAACAATATCGCTATACCTAGTTTTTATGTAAAAATTTTAAAAGCTAAAAA
CTATACAGAGTGCTATAAAGTGCCAAATAACGATAATTTTGCTGAATTTAATCGCAATTATTTTAAACAAGATTGTAAAA
ATTATATAAATTATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

59.633

100

0.596

  CJE0566 Campylobacter jejuni RM1221

60

98.624

0.592


Multiple sequence alignment