Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   CJM129_RS03295 Genome accession   NZ_CP007749
Coordinates   624722..625159 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni subsp. jejuni M129     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 619722..630159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJM129_RS09870 - 619903..620208 (+) 306 Protein_628 potassium-transporting ATPase subunit C -
  CJM129_RS09935 (CJM129_9115) - 620340..621360 (+) 1021 Protein_629 sensor histidine kinase KdpD -
  CJM129_RS10130 (CJM129_9120) - 621384..621572 (+) 189 WP_230099897.1 DUF4118 domain-containing protein -
  CJM129_RS10135 - 621601..621732 (+) 132 WP_230099906.1 hypothetical protein -
  CJM129_RS09945 (CJM129_9125) - 621708..622034 (+) 327 WP_224328091.1 hypothetical protein -
  CJM129_RS03280 (CJM129_3115) uvrB 622136..624109 (-) 1974 WP_002869815.1 excinuclease ABC subunit UvrB -
  CJM129_RS03285 (CJM129_3120) - 624263..624493 (+) 231 WP_002852327.1 hypothetical protein -
  CJM129_RS03290 (CJM129_3125) - 624483..624725 (+) 243 WP_002854947.1 hypothetical protein -
  CJM129_RS03295 (CJM129_3130) Cj0683 624722..625159 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  CJM129_RS03300 (CJM129_3135) priA 625141..626994 (+) 1854 WP_002860009.1 primosomal protein N' -
  CJM129_RS03305 (CJM129_3140) cipA 627004..628398 (-) 1395 WP_002860010.1 DUF2972 domain-containing protein -
  CJM129_RS03310 (CJM129_3145) ispG 628544..629617 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=123075 CJM129_RS03295 WP_002852324.1 624722..625159(+) (Cj0683) [Campylobacter jejuni subsp. jejuni M129]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=123075 CJM129_RS03295 WP_002852324.1 624722..625159(+) (Cj0683) [Campylobacter jejuni subsp. jejuni M129]
ATGAACAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTGTCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AATGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment