Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BMMGA3_RS05030 Genome accession   NZ_CP007739
Coordinates   1018278..1018760 (-) Length   160 a.a.
NCBI ID   WP_185762575.1    Uniprot ID   -
Organism   Bacillus methanolicus MGA3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1013278..1023760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMMGA3_RS05005 (BMMGA3_05165) - 1013401..1014549 (-) 1149 WP_003348720.1 aminotransferase A -
  BMMGA3_RS05010 (BMMGA3_05170) - 1014774..1014977 (-) 204 WP_003348722.1 hypothetical protein -
  BMMGA3_RS05015 (BMMGA3_05175) - 1015222..1015740 (+) 519 WP_003348724.1 RDD family protein -
  BMMGA3_RS05020 (BMMGA3_05180) - 1015922..1017268 (+) 1347 WP_003348725.1 MFS transporter -
  BMMGA3_RS05025 (BMMGA3_05185) - 1017341..1018246 (+) 906 WP_003348726.1 chemotaxis protein -
  BMMGA3_RS05030 (BMMGA3_05190) kre 1018278..1018760 (-) 483 WP_185762575.1 YkyB family protein Regulator
  BMMGA3_RS05035 (BMMGA3_05195) - 1019132..1020859 (+) 1728 WP_003348729.1 EAL domain-containing protein -
  BMMGA3_RS05040 (BMMGA3_05200) - 1020883..1021755 (-) 873 WP_003348730.1 metallophosphoesterase -
  BMMGA3_RS05045 (BMMGA3_05205) - 1021978..1022742 (-) 765 WP_003348731.1 C39 family peptidase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18249.20 Da        Isoelectric Point: 10.8702

>NTDB_id=122993 BMMGA3_RS05030 WP_185762575.1 1018278..1018760(-) (kre) [Bacillus methanolicus MGA3]
MKGAYHLNRKNRSHPPLHSTVENLAQAIFTVNRHAKTAPNPKYLYKLKHEALKKMISEGKAKKVGLHFSQNPKLCQQQSA
VLVVCGNYSFHIPPSKNDMKLLPHLGHLNQNVRNPKSRLSLNQAKKLLQSYTGLKEINTEPNNKTRSYQKPVFKKLGESY

Nucleotide


Download         Length: 483 bp        

>NTDB_id=122993 BMMGA3_RS05030 WP_185762575.1 1018278..1018760(-) (kre) [Bacillus methanolicus MGA3]
ATGAAAGGAGCTTATCATTTGAACAGGAAAAACAGAAGTCATCCTCCATTACATTCAACAGTTGAAAACCTCGCACAAGC
CATTTTTACCGTAAACCGTCATGCAAAAACTGCCCCAAACCCAAAATATTTATATAAACTCAAACATGAGGCTTTAAAAA
AGATGATATCAGAAGGTAAAGCAAAAAAAGTCGGACTCCATTTTTCACAAAACCCAAAACTGTGTCAACAGCAGTCAGCA
GTCCTTGTTGTTTGCGGTAATTATTCCTTTCATATTCCACCGTCCAAAAATGACATGAAATTACTACCACACTTGGGACA
TTTAAACCAAAACGTCCGCAACCCAAAATCCCGCCTATCTTTAAATCAGGCAAAAAAGCTATTGCAGTCTTATACGGGCT
TAAAAGAAATCAATACAGAACCGAATAATAAAACCCGCAGCTATCAAAAACCGGTCTTTAAAAAACTTGGAGAAAGTTAT
TGA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(21-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.194

90

0.569

Multiple sequence alignment