Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   M0579_RS03830 Genome accession   NZ_CP007668
Coordinates   807191..807889 (-) Length   232 a.a.
NCBI ID   WP_002223343.1    Uniprot ID   A0A422SVD5
Organism   Neisseria meningitidis M0579     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 802191..812889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0579_RS03815 (M0579_00710) - 802468..803547 (-) 1080 WP_002254133.1 peptidylprolyl isomerase -
  M0579_RS03820 (M0579_00711) - 803652..806060 (-) 2409 WP_025458511.1 LPS-assembly protein LptD -
  M0579_RS03825 (M0579_00712) amgK 806130..807134 (+) 1005 WP_002223344.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  M0579_RS03830 (M0579_00713) dsbA1 807191..807889 (-) 699 WP_002223343.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  M0579_RS03835 (M0579_00714) - 807916..808107 (+) 192 WP_002233473.1 hypothetical protein -
  M0579_RS03840 (M0579_00715) murJ 808107..809645 (+) 1539 WP_002223342.1 murein biosynthesis integral membrane protein MurJ -
  M0579_RS16350 - 809649..809780 (+) 132 WP_255304562.1 hypothetical protein -
  M0579_RS03845 (M0579_00716) - 809777..810733 (+) 957 WP_002223341.1 YheT family hydrolase -
  M0579_RS03850 (M0579_00717) trpC 810783..811565 (+) 783 WP_002223340.1 indole-3-glycerol phosphate synthase TrpC -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 25251.84 Da        Isoelectric Point: 5.1392

>NTDB_id=122229 M0579_RS03830 WP_002223343.1 807191..807889(-) (dsbA1) [Neisseria meningitidis M0579]
MKSRQLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAH
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLPLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 699 bp        

>NTDB_id=122229 M0579_RS03830 WP_002223343.1 807191..807889(-) (dsbA1) [Neisseria meningitidis M0579]
ATGAAATCCAGACAACTCGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGGCTGGTCGAAGGGCAAAACTATACCGTCCTTG
CCAACCCGATTCCCCAACAGCAGGCAGGCAAAGTCGAAGTCCTTGAGTTTTTCGGCTATTTCTGTCCGCACTGCGCCCAC
CTCGAACCTGTTTTGAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAGCATGTCGTTTGGCAAAA
AGAAATGCTGCCGCTGGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGACAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCCTACGAGTCCCCCGAAAGCCAGGCGCGCGCCGACAAAATGCAGGAGCTGACCGA
AACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGTAAATATAAAGTTGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCAGTAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(63-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A422SVD5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

98.707

100

0.987
  dsbA2 Neisseria meningitidis MC58

76.72

81.466

0.625

Multiple sequence alignment