Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   M0579_RS03145 Genome accession   NZ_CP007668
Coordinates   672408..673052 (-) Length   214 a.a.
NCBI ID   WP_002218776.1    Uniprot ID   -
Organism   Neisseria meningitidis M0579     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 667408..678052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0579_RS03110 (M0579_00580) ftsL 667777..668040 (-) 264 WP_002232818.1 cell division protein FtsL -
  M0579_RS03115 (M0579_00581) rsmH 668037..669023 (-) 987 WP_002218781.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  M0579_RS03120 (M0579_00582) mraZ 669020..669475 (-) 456 WP_002218779.1 division/cell wall cluster transcriptional repressor MraZ -
  M0579_RS03125 (M0579_00583) - 669754..670971 (+) 1218 WP_014575169.1 class I SAM-dependent methyltransferase -
  M0579_RS03140 (M0579_00586) - 671553..672374 (-) 822 WP_002218777.1 undecaprenyl-diphosphate phosphatase -
  M0579_RS03145 (M0579_00587) dsbA1 672408..673052 (-) 645 WP_002218776.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  M0579_RS03150 (M0579_00588) ftsN 673055..673900 (-) 846 WP_002218775.1 cell division protein FtsN -
  M0579_RS03155 (M0579_00589) comM 674006..675502 (-) 1497 WP_002218774.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  M0579_RS03160 (M0579_00590) - 675516..675836 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  M0579_RS03170 (M0579_00591) putP 676319..677845 (+) 1527 WP_002220352.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23890.90 Da        Isoelectric Point: 9.8297

>NTDB_id=122223 M0579_RS03145 WP_002218776.1 672408..673052(-) (dsbA1) [Neisseria meningitidis M0579]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVRAERKLSNHPVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=122223 M0579_RS03145 WP_002218776.1 672408..673052(-) (dsbA1) [Neisseria meningitidis M0579]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGTAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAACTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCAAGAATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCCGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATACCGCATCGACAGCACGCCGACCGTTGTCGTCGGCGGAAAATACCGCGTTATCTTCAATAACGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGCGGAGCGCAAACTGTCAAACCATCCTGTGCAAA
AATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.15

87.383

0.491
  dsbA2 Neisseria meningitidis MC58

50.811

86.449

0.439

Multiple sequence alignment