Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   M0579_RS01085 Genome accession   NZ_CP007668
Coordinates   235989..236450 (+) Length   153 a.a.
NCBI ID   WP_002216872.1    Uniprot ID   A0A2J1SH93
Organism   Neisseria meningitidis M0579     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 230989..241450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0579_RS01060 (M0579_00206) - 232124..232333 (-) 210 WP_002223595.1 tautomerase family protein -
  M0579_RS01065 (M0579_00207) - 232678..233484 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  M0579_RS01070 (M0579_00208) - 233542..234807 (-) 1266 WP_002219042.1 Glu/Leu/Phe/Val family dehydrogenase -
  M0579_RS01080 (M0579_00209) - 235214..235921 (+) 708 WP_002219041.1 phosphoglycolate phosphatase -
  M0579_RS01085 (M0579_00210) recX 235989..236450 (+) 462 WP_002216872.1 recombination regulator RecX Regulator
  M0579_RS15725 (M0579_00211) - 236524..236685 (+) 162 WP_002232730.1 hypothetical protein -
  M0579_RS01100 (M0579_00212) - 236838..237320 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  M0579_RS01105 (M0579_00213) - 237527..238774 (-) 1248 WP_002219040.1 M23 family metallopeptidase -
  M0579_RS01110 (M0579_00214) surE 239041..239787 (-) 747 WP_002223592.1 5'/3'-nucleotidase SurE -
  M0579_RS01115 (M0579_00215) - 239804..241360 (-) 1557 WP_002223591.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.03 Da        Isoelectric Point: 10.0960

>NTDB_id=122220 M0579_RS01085 WP_002216872.1 235989..236450(+) (recX) [Neisseria meningitidis M0579]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=122220 M0579_RS01085 WP_002216872.1 235989..236450(+) (recX) [Neisseria meningitidis M0579]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAAGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

98.039

100

0.98

Multiple sequence alignment