Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | B6116_RS06540 | Genome accession | NZ_CP007667 |
| Coordinates | 1260633..1261226 (+) | Length | 197 a.a. |
| NCBI ID | WP_047957334.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain B6116/77 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1255633..1266226
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6116_RS06515 (B6116_01226) | - | 1255903..1256490 (-) | 588 | WP_002220670.1 | superoxide dismutase | - |
| B6116_RS06520 (B6116_01227) | dnaB | 1256653..1258059 (+) | 1407 | WP_002227431.1 | replicative DNA helicase | - |
| B6116_RS06525 (B6116_01228) | pilH | 1258368..1259033 (+) | 666 | WP_047957332.1 | GspH/FimT family pseudopilin | Machinery gene |
| B6116_RS06530 (B6116_01229) | pilV | 1259066..1259677 (+) | 612 | WP_047957366.1 | type IV pilus modification protein PilV | Machinery gene |
| B6116_RS06535 (B6116_01230) | pilJ | 1259674..1260654 (+) | 981 | WP_047957333.1 | PilW family protein | Machinery gene |
| B6116_RS06540 (B6116_01231) | pilK | 1260633..1261226 (+) | 594 | WP_047957334.1 | pilus assembly PilX family protein | Machinery gene |
| B6116_RS06545 (B6116_01232) | pilX | 1261231..1261704 (+) | 474 | WP_193376947.1 | PilX family type IV pilin | Machinery gene |
| B6116_RS06555 (B6116_01233) | - | 1264804..1265232 (-) | 429 | Protein_1237 | AzlC family ABC transporter permease | - |
| B6116_RS06560 (B6116_01234) | dut | 1265375..1265827 (+) | 453 | WP_002226436.1 | dUTP diphosphatase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21553.47 Da Isoelectric Point: 8.0847
>NTDB_id=122204 B6116_RS06540 WP_047957334.1 1260633..1261226(+) (pilK) [Neisseria meningitidis strain B6116/77]
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALSLAEAALREGELQVLDLEYDT
DSKVTFSENCGKGLCTAVNVRTNNDNEEAFDNIVVQGKPTVEAVKRSCTAKSTGLCIDKKGTEYKKGKGSVSKPPRYIIE
YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALSLAEAALREGELQVLDLEYDT
DSKVTFSENCGKGLCTAVNVRTNNDNEEAFDNIVVQGKPTVEAVKRSCTAKSTGLCIDKKGTEYKKGKGSVSKPPRYIIE
YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE
Nucleotide
Download Length: 594 bp
>NTDB_id=122204 B6116_RS06540 WP_047957334.1 1260633..1261226(+) (pilK) [Neisseria meningitidis strain B6116/77]
ATGCGCAAACAGAACACTTTGACGGGAATCCCGACTTCTGACGGACAGAGGGGGTTTGCACTGTTTATCGTGCTGATGGT
GATGATCGTCGTGGCTTTTTTGGTTGTAACTGCCGCGCAGTCTTACAATACCGAGCAGCGGATCAGTGCCAACGAATCAG
ACAGGAAATTGGCTTTGTCTTTGGCCGAGGCGGCTTTGCGGGAAGGCGAACTTCAGGTTTTGGATTTGGAATATGATACG
GACAGTAAGGTTACATTTAGCGAAAACTGTGGAAAAGGTCTGTGTACCGCAGTGAATGTGCGGACAAATAATGATAATGA
AGAGGCTTTTGACAATATCGTGGTGCAAGGCAAGCCCACCGTTGAGGCGGTGAAGCGTTCTTGCACTGCAAAATCTACAG
GCCTGTGCATTGACAAGAAAGGGACGGAATATAAGAAAGGCAAGGGAAGCGTCAGCAAACCACCACGCTATATTATCGAA
TATTTGGGCGTGAAGAACGGAGAAAATGTTTATCGGGTTACTGCCAAGGCTTGGGGTAAGAATGCCAATACCGTGGTCGT
CCTTCAATCTTATGTAAGCAATAATGATGAGTAA
ATGCGCAAACAGAACACTTTGACGGGAATCCCGACTTCTGACGGACAGAGGGGGTTTGCACTGTTTATCGTGCTGATGGT
GATGATCGTCGTGGCTTTTTTGGTTGTAACTGCCGCGCAGTCTTACAATACCGAGCAGCGGATCAGTGCCAACGAATCAG
ACAGGAAATTGGCTTTGTCTTTGGCCGAGGCGGCTTTGCGGGAAGGCGAACTTCAGGTTTTGGATTTGGAATATGATACG
GACAGTAAGGTTACATTTAGCGAAAACTGTGGAAAAGGTCTGTGTACCGCAGTGAATGTGCGGACAAATAATGATAATGA
AGAGGCTTTTGACAATATCGTGGTGCAAGGCAAGCCCACCGTTGAGGCGGTGAAGCGTTCTTGCACTGCAAAATCTACAG
GCCTGTGCATTGACAAGAAAGGGACGGAATATAAGAAAGGCAAGGGAAGCGTCAGCAAACCACCACGCTATATTATCGAA
TATTTGGGCGTGAAGAACGGAGAAAATGTTTATCGGGTTACTGCCAAGGCTTGGGGTAAGAATGCCAATACCGTGGTCGT
CCTTCAATCTTATGTAAGCAATAATGATGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
86.634 |
100 |
0.888 |