Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   B6116_RS00200 Genome accession   NZ_CP007667
Coordinates   42443..43087 (-) Length   214 a.a.
NCBI ID   WP_002220358.1    Uniprot ID   A0A0U1RK99
Organism   Neisseria meningitidis strain B6116/77     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 37443..48087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B6116_RS00165 (B6116_00032) ftsL 37813..38076 (-) 264 WP_002232818.1 cell division protein FtsL -
  B6116_RS00170 (B6116_00033) rsmH 38073..39059 (-) 987 WP_002244453.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  B6116_RS00175 (B6116_00034) mraZ 39056..39511 (-) 456 WP_002222027.1 division/cell wall cluster transcriptional repressor MraZ -
  B6116_RS00180 (B6116_00035) - 39790..41007 (+) 1218 WP_017201236.1 class I SAM-dependent methyltransferase -
  B6116_RS00195 (B6116_00038) - 41589..42410 (-) 822 WP_002244454.1 undecaprenyl-diphosphate phosphatase -
  B6116_RS00200 (B6116_00039) dsbA1 42443..43087 (-) 645 WP_002220358.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  B6116_RS00205 (B6116_00040) ftsN 43090..43953 (-) 864 WP_002244455.1 cell division protein FtsN -
  B6116_RS00210 (B6116_00041) comM 44059..45555 (-) 1497 WP_002238765.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  B6116_RS00215 (B6116_00042) - 45569..45889 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  B6116_RS00225 (B6116_00043) putP 46372..47898 (+) 1527 WP_002227025.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23970.99 Da        Isoelectric Point: 10.0160

>NTDB_id=122171 B6116_RS00200 WP_002220358.1 42443..43087(-) (dsbA1) [Neisseria meningitidis strain B6116/77]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVKLSGLKYQANPAVFKAVYEQKIRLENRSVAEKWALSQKGFDGKKLMRAYDSPAAAAAASKMQQ
LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=122171 B6116_RS00200 WP_002220358.1 42443..43087(-) (dsbA1) [Neisseria meningitidis strain B6116/77]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAAAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTAAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCAGGTTTGAAATATCAGGCAAA
CCCTGCCGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGTCGGTTGCCGAAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTACGACTCTCCTGCGGCAGCGGCTGCTGCATCAAAAATGCAGCAA
TTGACGGAACAGTACCGCATCGACAGTACGCCGACCGTTGTCGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGTGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(86-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U1RK99

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

55.851

87.85

0.491
  dsbA2 Neisseria meningitidis MC58

50.538

86.916

0.439

Multiple sequence alignment