Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ER16_RS11110 | Genome accession | NZ_CP007659 |
| Coordinates | 2193493..2193888 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain H-EMRSA-15 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2188493..2198888
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ER16_RS11080 (ER16_10620) | thiE | 2189092..2189733 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| ER16_RS11085 (ER16_10625) | thiM | 2189735..2190526 (-) | 792 | WP_001108482.1 | hydroxyethylthiazole kinase | - |
| ER16_RS11090 (ER16_10630) | thiD | 2190510..2191340 (-) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ER16_RS11095 (ER16_10635) | tenA | 2191333..2192022 (-) | 690 | WP_000396069.1 | thiaminase II | - |
| ER16_RS11105 (ER16_10640) | sceD | 2192409..2193104 (-) | 696 | WP_000752002.1 | lytic transglycosylase SceD | - |
| ER16_RS11110 (ER16_10645) | ssb | 2193493..2193888 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| ER16_RS11115 (ER16_10650) | - | 2194082..2194522 (+) | 441 | WP_000846750.1 | YwpF-like family protein | - |
| ER16_RS11120 (ER16_10655) | fabZ | 2194580..2195020 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ER16_RS11125 (ER16_10660) | murA | 2195054..2196319 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ER16_RS11130 (ER16_10665) | - | 2196430..2196663 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ER16_RS11135 | - | 2196795..2196887 (-) | 93 | WP_031789435.1 | hypothetical protein | - |
| ER16_RS11145 (ER16_10675) | - | 2197339..2197743 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=122113 ER16_RS11110 WP_000932694.1 2193493..2193888(-) (ssb) [Staphylococcus aureus strain H-EMRSA-15]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=122113 ER16_RS11110 WP_000932694.1 2193493..2193888(-) (ssb) [Staphylococcus aureus strain H-EMRSA-15]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |