Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ER16_RS04575 Genome accession   NZ_CP007659
Coordinates   954122..955108 (+) Length   328 a.a.
NCBI ID   WP_038411781.1    Uniprot ID   -
Organism   Staphylococcus aureus strain H-EMRSA-15     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 949122..960108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ER16_RS14700 (ER16_04360) - 949955..950464 (+) 510 Protein_872 transposase -
  ER16_RS04555 (ER16_04365) trpS 950490..951479 (-) 990 WP_000448941.1 tryptophan--tRNA ligase -
  ER16_RS04560 (ER16_04370) spxA 951774..952169 (+) 396 WP_000258001.1 transcriptional regulator SpxA -
  ER16_RS04565 (ER16_04375) tnpA 952381..952866 (+) 486 WP_000093392.1 IS200/IS605 family transposase -
  ER16_RS04570 (ER16_04380) mecA 953282..954001 (+) 720 WP_001217724.1 adaptor protein MecA -
  ER16_RS04575 (ER16_04385) coiA 954122..955108 (+) 987 WP_038411781.1 competence protein CoiA Machinery gene
  ER16_RS04580 (ER16_04390) pepF 955156..956964 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  ER16_RS04585 (ER16_04395) yjbH 957424..958230 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  ER16_RS04590 (ER16_04400) - 958253..958618 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  ER16_RS04595 (ER16_04405) - 958722..959315 (-) 594 WP_000224621.1 CYTH domain-containing protein -
  ER16_RS04600 (ER16_04410) - 959501..959848 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38727.42 Da        Isoelectric Point: 9.5127

>NTDB_id=122086 ER16_RS04575 WP_038411781.1 954122..955108(+) (coiA) [Staphylococcus aureus strain H-EMRSA-15]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCLWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLLLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=122086 ER16_RS04575 WP_038411781.1 954122..955108(+) (coiA) [Staphylococcus aureus strain H-EMRSA-15]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTTGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCTCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATTGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

98.78

100

0.988
  coiA Staphylococcus aureus MW2

97.561

100

0.976

Multiple sequence alignment