Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   MA06_RS20825 Genome accession   NZ_CP007626
Coordinates   3716505..3717182 (+) Length   225 a.a.
NCBI ID   WP_003195931.1    Uniprot ID   A0A2A8H3K8
Organism   Bacillus pseudomycoides strain 219298     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 3711505..3722182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA06_RS20805 (DJ92_3803) - 3712256..3713902 (+) 1647 WP_006093963.1 peptide ABC transporter substrate-binding protein -
  MA06_RS20810 (DJ92_3804) - 3713936..3714139 (-) 204 WP_018781155.1 hypothetical protein -
  MA06_RS20815 (DJ92_3805) spx 3714760..3715155 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  MA06_RS20820 (DJ92_3806) - 3715467..3716138 (-) 672 WP_018764011.1 TerC family protein -
  MA06_RS20825 (DJ92_3807) mecA 3716505..3717182 (+) 678 WP_003195931.1 adaptor protein MecA Regulator
  MA06_RS20830 (DJ92_3808) cls 3717266..3718810 (+) 1545 WP_018781154.1 cardiolipin synthase -
  MA06_RS20835 (DJ92_3809) - 3718905..3720146 (+) 1242 WP_018781153.1 competence protein CoiA family protein -
  MA06_RS20840 (DJ92_3810) pepF 3720193..3722019 (+) 1827 WP_040119303.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 225 a.a.        Molecular weight: 26813.93 Da        Isoelectric Point: 4.0694

>NTDB_id=121786 MA06_RS20825 WP_003195931.1 3716505..3717182(+) (mecA) [Bacillus pseudomycoides strain 219298]
MDIERINDHTMKFFITYVDIEDRGFNREEIWSSRERSEQLFWEMMDEARDHDDFFIDGPLWIQVQAMDKGIEVLVTKAQL
SKDGQKLELPIGLDKIIDIPLDERIESLFQQELEEEMEAGTNFNEDGTFGFLIKFDDFEDVISLSHRLIFEDIKDELYSF
EDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTVHRVSEYGKQVVKERALETIRSHFSPKT

Nucleotide


Download         Length: 678 bp        

>NTDB_id=121786 MA06_RS20825 WP_003195931.1 3716505..3717182(+) (mecA) [Bacillus pseudomycoides strain 219298]
TTGGACATTGAAAGAATTAACGATCATACGATGAAGTTTTTTATTACGTACGTTGATATAGAAGATAGAGGGTTTAATCG
AGAAGAGATTTGGTCCAGTCGTGAACGAAGCGAACAATTATTTTGGGAAATGATGGATGAAGCTCGCGATCATGATGATT
TCTTTATTGATGGGCCACTATGGATCCAAGTACAGGCGATGGATAAAGGCATTGAAGTACTTGTAACGAAAGCACAGCTT
TCAAAAGATGGACAAAAATTAGAATTACCAATAGGTCTAGATAAAATCATTGATATTCCTCTAGATGAGCGGATTGAATC
ACTATTTCAACAGGAGTTAGAGGAAGAGATGGAAGCGGGAACAAACTTTAACGAAGATGGAACATTTGGTTTTTTAATTA
AATTTGATGATTTTGAAGACGTTATTTCGTTAAGTCATCGTCTTATATTTGAAGATATAAAAGATGAATTGTATTCGTTT
GAAGACCGCTATTATGTATATGTTGAATTTGATGAAGTGCTACACGATGAAGAAGAAATTGACCGTATTTTAAGTATTAT
TTTAGAATATGGGGAAGAGTCTACTTTAACGGTTCACCGTGTAAGTGAGTACGGTAAACAGGTTGTTAAAGAACGCGCAC
TTGAGACGATTCGCAGTCATTTTTCTCCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A8H3K8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.505

98.667

0.538


Multiple sequence alignment