Detailed information
Bioinformatically predicted
Overview
| Name | comB7 | Type | Machinery gene |
| Locus tag | EG64_RS00215 | Genome accession | NZ_CP007606 |
| Coordinates | 37462..37575 (+) | Length | 37 a.a. |
| NCBI ID | WP_001217873.1 | Uniprot ID | G2MCV1 |
| Organism | Helicobacter pylori strain BM013B | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 32462..42575
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG64_RS00190 (EG64_00195) | - | 32515..34740 (+) | 2226 | WP_038417111.1 | AAA family ATPase | - |
| EG64_RS00195 (EG64_00200) | panD | 34730..35083 (+) | 354 | WP_038417112.1 | aspartate 1-decarboxylase | - |
| EG64_RS00200 (EG64_00205) | - | 35086..35388 (+) | 303 | WP_000347928.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EG64_RS00205 (EG64_00210) | - | 35388..36383 (+) | 996 | WP_038417113.1 | PDZ domain-containing protein | - |
| EG64_RS00210 (EG64_00215) | comB6 | 36391..37446 (+) | 1056 | WP_038417114.1 | P-type conjugative transfer protein TrbL | Machinery gene |
| EG64_RS00215 | comB7 | 37462..37575 (+) | 114 | WP_001217873.1 | hypothetical protein | Machinery gene |
| EG64_RS00220 (EG64_00225) | comB8 | 37572..38315 (+) | 744 | WP_038417115.1 | type IV secretion system protein | Machinery gene |
| EG64_RS00225 (EG64_00230) | comB9 | 38315..39286 (+) | 972 | WP_038417116.1 | TrbG/VirB9 family P-type conjugative transfer protein | Machinery gene |
| EG64_RS00230 (EG64_00235) | comB10 | 39279..40415 (+) | 1137 | WP_038417117.1 | DNA type IV secretion system protein ComB10 | Machinery gene |
| EG64_RS00235 (EG64_00240) | - | 40485..41903 (+) | 1419 | WP_038417118.1 | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - |
Sequence
Protein
Download Length: 37 a.a. Molecular weight: 4325.25 Da Isoelectric Point: 9.3572
>NTDB_id=121605 EG64_RS00215 WP_001217873.1 37462..37575(+) (comB7) [Helicobacter pylori strain BM013B]
MRIFFVIMGLVFFGCTSKVHEMKKSPCTLYENRLNLA
MRIFFVIMGLVFFGCTSKVHEMKKSPCTLYENRLNLA
Nucleotide
Download Length: 114 bp
>NTDB_id=121605 EG64_RS00215 WP_001217873.1 37462..37575(+) (comB7) [Helicobacter pylori strain BM013B]
ATGAGAATTTTTTTTGTTATTATGGGACTTGTGTTTTTTGGTTGCACCAGTAAGGTGCATGAGATGAAAAAAAGCCCTTG
CACATTGTATGAAAATAGGTTGAATCTCGCATGA
ATGAGAATTTTTTTTGTTATTATGGGACTTGTGTTTTTTGGTTGCACCAGTAAGGTGCATGAGATGAAAAAAAGCCCTTG
CACATTGTATGAAAATAGGTTGAATCTCGCATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB7 | Helicobacter pylori P1 |
100 |
100 |
1 |