Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ayp1020_RS08920 Genome accession   NZ_CP007601
Coordinates   1852571..1853467 (-) Length   298 a.a.
NCBI ID   WP_047796787.1    Uniprot ID   -
Organism   Staphylococcus capitis subsp. capitis strain AYP1020     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1847571..1858467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ayp1020_RS08905 (AYP1020_1814) - 1848595..1849467 (-) 873 WP_047796784.1 DUF4064 domain-containing protein -
  ayp1020_RS08910 (AYP1020_1815) - 1849695..1851518 (-) 1824 WP_233420416.1 FtsX-like permease family protein -
  ayp1020_RS08915 (AYP1020_1816) - 1851712..1852461 (-) 750 WP_047796786.1 ABC transporter ATP-binding protein -
  ayp1020_RS08920 (AYP1020_1817) braS 1852571..1853467 (-) 897 WP_047796787.1 sensor histidine kinase Regulator
  ayp1020_RS08925 (AYP1020_1818) braR 1853473..1854138 (-) 666 WP_047796788.1 response regulator transcription factor Regulator
  ayp1020_RS12430 (AYP1020_1819) - 1854169..1854321 (-) 153 WP_192940984.1 hypothetical protein -
  ayp1020_RS08930 (AYP1020_1820) - 1854648..1856132 (+) 1485 WP_047796789.1 alkaline phosphatase -
  ayp1020_RS08935 (AYP1020_1821) - 1856326..1857867 (-) 1542 WP_047796790.1 NAD(P)H-binding protein -
  ayp1020_RS12110 (AYP1020_1822) - 1858051..1858152 (-) 102 WP_016898541.1 SE2200 family small protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34614.94 Da        Isoelectric Point: 5.4142

>NTDB_id=121526 ayp1020_RS08920 WP_047796787.1 1852571..1853467(-) (braS) [Staphylococcus capitis subsp. capitis strain AYP1020]
MLLSFIKSIRNEITIIFCIFLLFALIFYLFSLPFSAFGLALGIVLLIIFIHWWVKYLGFKRNEDLKEKIDDLENELTEVK
NRQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISSVTVNEL
IRPLIMKYRIQFIEQHTKIHYEKCEATVLTDAQWASIMIEQILNNALKYARGKDIWIEFDSAKQTLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHVVDVDSELGEGTTFKIHFPNED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=121526 ayp1020_RS08920 WP_047796787.1 1852571..1853467(-) (braS) [Staphylococcus capitis subsp. capitis strain AYP1020]
ATGTTACTATCTTTTATAAAATCGATTCGAAATGAGATTACAATTATATTTTGTATATTTTTATTATTTGCATTAATATT
TTACTTATTTTCATTACCATTTAGTGCCTTCGGGCTTGCGTTAGGAATCGTATTACTCATCATTTTTATTCATTGGTGGG
TCAAGTACCTTGGATTTAAGAGAAATGAGGATCTTAAAGAGAAGATAGATGATTTGGAAAATGAATTAACTGAAGTAAAA
AATCGCCAAGTAGAATATCGTAATGATGTTGAAAGTTACTTTTTAACATGGGTACACCAAATTAAGACACCTATCACAGC
GTCACAACTATTACTCGAACGTAATGAAGAAAATGTTGTCAATCGCGTAAGACAAGAAATTGTTCAAATTGATAACTATA
CAAGCTTAGCATTGAGTTATTTAAAATTACTCAACGAAGAATCTGATATGACAATTTCATCAGTGACAGTGAATGAATTA
ATACGTCCGTTAATCATGAAATATCGAATTCAATTTATCGAACAACATACTAAAATACACTATGAAAAGTGTGAAGCAAC
TGTTTTAACGGATGCACAATGGGCGTCTATTATGATAGAACAAATTTTAAATAATGCTTTGAAGTACGCGCGTGGAAAAG
ACATTTGGATTGAATTTGATTCTGCTAAACAAACATTAATCATTAAAGACAATGGTGTAGGTATTAGTAAAGCAGATATT
CCTAAAATATTTGATAAAGGCTATTCTGGTTACAACGGCAGACTTAATGAAGAATCAAGCGGCATAGGATTGTTCATTGT
TAAGCATATTTCTAATCATTTGAATCATGTAGTCGATGTGGATTCAGAACTTGGTGAAGGTACTACATTTAAAATACATT
TTCCCAATGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

64.407

98.993

0.638

Multiple sequence alignment