Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ayp1020_RS06290 | Genome accession | NZ_CP007601 |
| Coordinates | 1316518..1316913 (-) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis subsp. capitis strain AYP1020 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1311518..1321913
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ayp1020_RS06265 (AYP1020_1278) | thiE | 1312173..1312811 (-) | 639 | WP_047796514.1 | thiamine phosphate synthase | - |
| ayp1020_RS06270 (AYP1020_1279) | thiM | 1312818..1313606 (-) | 789 | WP_002435520.1 | hydroxyethylthiazole kinase | - |
| ayp1020_RS06275 (AYP1020_1280) | thiD | 1313599..1314420 (-) | 822 | WP_047796515.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ayp1020_RS06280 (AYP1020_1281) | tenA | 1314407..1315102 (-) | 696 | WP_047796516.1 | thiaminase II | - |
| ayp1020_RS06285 (AYP1020_1282) | - | 1315398..1316123 (-) | 726 | WP_002453702.1 | transglycosylase family protein | - |
| ayp1020_RS06290 (AYP1020_1283) | ssb | 1316518..1316913 (-) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| ayp1020_RS06295 (AYP1020_1284) | - | 1317104..1317547 (+) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| ayp1020_RS06300 (AYP1020_1285) | fabZ | 1317628..1318065 (-) | 438 | WP_002435844.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ayp1020_RS06305 (AYP1020_1286) | murA | 1318110..1319375 (-) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ayp1020_RS06310 (AYP1020_1287) | - | 1319485..1319718 (-) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| ayp1020_RS06315 (AYP1020_1288) | - | 1319859..1320263 (-) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| ayp1020_RS06320 (AYP1020_1289) | atpD | 1320283..1321695 (-) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=121522 ayp1020_RS06290 WP_002435780.1 1316518..1316913(-) (ssb) [Staphylococcus capitis subsp. capitis strain AYP1020]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=121522 ayp1020_RS06290 WP_002435780.1 1316518..1316913(-) (ssb) [Staphylococcus capitis subsp. capitis strain AYP1020]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |