Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DK41_RS09830 Genome accession   NZ_CP007570
Coordinates   1986887..1988146 (-) Length   419 a.a.
NCBI ID   WP_000900646.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GBS1-NY     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1981887..1993146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK41_RS09820 (DK41_09955) - 1984233..1984817 (-) 585 WP_000842268.1 glycoside hydrolase family 73 protein -
  DK41_RS09825 (DK41_09960) - 1984942..1986795 (-) 1854 WP_000814013.1 proline--tRNA ligase -
  DK41_RS09830 (DK41_09965) eeP 1986887..1988146 (-) 1260 WP_000900646.1 RIP metalloprotease RseP Regulator
  DK41_RS09835 (DK41_09970) - 1988177..1988971 (-) 795 WP_000664685.1 phosphatidate cytidylyltransferase -
  DK41_RS09840 (DK41_09975) - 1988986..1989738 (-) 753 WP_041330069.1 isoprenyl transferase -
  DK41_RS09845 (DK41_09980) yajC 1989905..1990246 (-) 342 WP_000056607.1 preprotein translocase subunit YajC -
  DK41_RS09850 (DK41_09985) - 1990323..1990667 (-) 345 WP_000286792.1 thioredoxin domain-containing protein -
  DK41_RS09855 (DK41_09990) - 1990858..1992021 (-) 1164 WP_001293700.1 NADP-dependent malic enzyme -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46093.12 Da        Isoelectric Point: 10.0321

>NTDB_id=121073 DK41_RS09830 WP_000900646.1 1986887..1988146(-) (eeP) [Streptococcus agalactiae strain GBS1-NY]
MLGILTFIIIFGVIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFSHIDKEGTTYTIRILPLGGYVRMAGWGDDKTEIKT
GTPANLTLNKEGIVTRINLSGKQLDNTSLPINVTAYDLEDKLTITGLVLSETKTYSVDHDATIIEEDGTEVRIAPLDVQY
QNASVWGRLITNFAGPMNNFILGLVVFIALAFIQGGVQDLSTNQVRVSENGPAASAGLKNNDRILQIGSHKVSNWEQLTA
AVEKSTSRLEKNQKLALKIKSKEVVKTINVKPQKVDKSYIIGIMPALKTSFKDKLLGGFKLAWESFFRILNELKKLIAHF
SINKLGGPVALYQASSQAAKNGFVTVLNLMGLISINLGIMNLIPIPALDGGKIVMNILEAIRRKPLKQETETYIMLAGVA
VMLVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=121073 DK41_RS09830 WP_000900646.1 1986887..1988146(-) (eeP) [Streptococcus agalactiae strain GBS1-NY]
ATGCTAGGAATTTTAACCTTTATTATTATTTTTGGTGTCATTGTAGTTGTTCACGAATTTGGGCATTTCTATTTTGCAAA
GAAATCAGGAATTCTTGTTCGTGAATTTGCTATTGGTATGGGTCCAAAAATCTTTTCTCACATTGATAAAGAAGGAACAA
CCTATACTATTCGTATATTACCGCTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGATGATAAGACTGAAATTAAGACA
GGGACGCCGGCTAACCTTACTTTAAATAAAGAAGGCATTGTAACTCGTATTAATTTATCAGGAAAACAATTAGACAATAC
TTCTTTACCAATTAATGTAACAGCTTATGATTTAGAAGATAAACTAACTATCACAGGATTGGTCTTAAGTGAGACAAAAA
CCTATAGTGTTGATCACGATGCTACTATCATTGAGGAGGATGGTACTGAAGTTCGTATTGCTCCCTTAGATGTGCAGTAT
CAGAATGCTTCTGTATGGGGGCGCTTAATTACCAATTTTGCAGGTCCGATGAATAATTTTATTTTAGGTCTTGTAGTCTT
TATTGCACTTGCTTTTATTCAAGGGGGTGTTCAAGATTTATCAACCAATCAGGTCCGTGTATCAGAAAATGGTCCTGCTG
CTAGTGCAGGTTTGAAAAATAATGACCGTATTTTACAAATAGGGTCGCACAAAGTTTCTAACTGGGAACAGTTGACAGCA
GCAGTAGAAAAGTCAACTAGTCGTTTAGAAAAAAACCAAAAACTTGCTCTTAAGATTAAGAGTAAAGAGGTGGTGAAAAC
GATCAACGTTAAGCCACAGAAAGTTGATAAATCCTACATCATCGGCATTATGCCAGCTCTAAAGACAAGCTTTAAAGACA
AGCTTTTAGGTGGATTTAAACTAGCATGGGAAAGTTTCTTTAGAATTTTAAATGAATTAAAGAAACTTATTGCTCATTTT
AGTATTAATAAATTGGGAGGTCCAGTAGCTCTCTATCAGGCTAGTAGCCAAGCTGCTAAAAATGGTTTCGTCACAGTTCT
CAACTTAATGGGATTAATCTCTATCAACTTAGGTATTATGAATCTCATCCCTATACCAGCCCTTGACGGGGGTAAGATAG
TGATGAATATTTTAGAAGCCATTCGTCGCAAACCACTTAAACAAGAAACAGAAACTTATATTATGCTCGCTGGGGTAGCA
GTTATGTTAGTATTAATGATTGCTGTAACCTGGAACGATATCATGCGAGCTTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(205-271)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.048

100

0.692

  eeP Streptococcus thermophilus LMD-9

68.81

100

0.69


Multiple sequence alignment