Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DK93_RS06280 Genome accession   NZ_CP007562
Coordinates   1284905..1285714 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NGAS327     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1279905..1290714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK93_RS06270 (DK93_06455) smc 1280241..1283780 (-) 3540 WP_038431234.1 chromosome segregation protein SMC -
  DK93_RS06275 (DK93_06460) rnc 1283781..1284473 (-) 693 WP_002985639.1 ribonuclease III -
  DK93_RS06280 (DK93_06465) vicX 1284905..1285714 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DK93_RS06285 (DK93_06470) vicK 1285718..1287070 (-) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DK93_RS06290 (DK93_06475) vicR 1287063..1287773 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DK93_RS06295 (DK93_06480) - 1287935..1288969 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DK93_RS06300 (DK93_06485) - 1289025..1290272 (-) 1248 WP_009880281.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=120953 DK93_RS06280 WP_002985641.1 1284905..1285714(-) (vicX) [Streptococcus pyogenes strain NGAS327]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=120953 DK93_RS06280 WP_002985641.1 1284905..1285714(-) (vicX) [Streptococcus pyogenes strain NGAS327]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment