Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DK92_RS06585 Genome accession   NZ_CP007561
Coordinates   1344138..1344947 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NGAS596     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1339138..1349947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK92_RS06575 (DK92_06755) smc 1339463..1343002 (-) 3540 WP_047235921.1 chromosome segregation protein SMC -
  DK92_RS06580 (DK92_06760) rnc 1343003..1343695 (-) 693 WP_002990670.1 ribonuclease III -
  DK92_RS06585 (DK92_06765) vicX 1344138..1344947 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DK92_RS06590 (DK92_06770) vicK 1344951..1346303 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DK92_RS06595 (DK92_06775) vicR 1346296..1347006 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DK92_RS06600 (DK92_06780) - 1347168..1348202 (-) 1035 WP_172448820.1 DUF3114 domain-containing protein -
  DK92_RS06605 (DK92_06785) - 1348258..1349505 (-) 1248 WP_014407393.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=120901 DK92_RS06585 WP_002985641.1 1344138..1344947(-) (vicX) [Streptococcus pyogenes strain NGAS596]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=120901 DK92_RS06585 WP_002985641.1 1344138..1344947(-) (vicX) [Streptococcus pyogenes strain NGAS596]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment