Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | X998_RS01290 | Genome accession | NZ_CP007539 |
| Coordinates | 231142..231537 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_5 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 226142..236537
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| X998_RS01260 (X998_2081) | - | 227400..227804 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| X998_RS01265 (X998_03675) | - | 228142..228234 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| X998_RS01270 (X998_2080) | - | 228366..228599 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| X998_RS01275 (X998_2079) | murA | 228710..229975 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| X998_RS01280 (X998_2078) | fabZ | 230009..230449 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| X998_RS01285 (X998_2077) | - | 230508..230948 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| X998_RS01290 (X998_2076) | ssb | 231142..231537 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| X998_RS01295 (X998_2075) | sceD | 231926..232621 (+) | 696 | WP_000752009.1 | lytic transglycosylase SceD | - |
| X998_RS01300 (X998_2073) | tenA | 233007..233696 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| X998_RS01305 (X998_2072) | thiD | 233689..234519 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| X998_RS01310 (X998_2071) | thiM | 234503..235294 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| X998_RS01315 (X998_2070) | thiE | 235296..235937 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=120657 X998_RS01290 WP_000932694.1 231142..231537(+) (ssb) [Staphylococcus aureus strain FDAARGOS_5]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=120657 X998_RS01290 WP_000932694.1 231142..231537(+) (ssb) [Staphylococcus aureus strain FDAARGOS_5]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |