Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   UIB01_RS01450 Genome accession   NZ_CP007509
Coordinates   304606..305013 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas decontaminans strain 19SMN4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 299606..310013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UIB01_RS01420 (UIB01_01445) - 299768..300784 (-) 1017 WP_038656170.1 aspartate carbamoyltransferase catalytic subunit -
  UIB01_RS01425 (UIB01_01450) pyrR 300842..301354 (-) 513 WP_038656172.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  UIB01_RS01430 (UIB01_01455) ruvX 301377..301805 (-) 429 WP_038656173.1 Holliday junction resolvase RuvX -
  UIB01_RS01435 (UIB01_01460) - 301802..302371 (-) 570 WP_038656176.1 YqgE/AlgH family protein -
  UIB01_RS01440 (UIB01_01465) - 302438..303331 (-) 894 WP_038656178.1 energy transducer TonB -
  UIB01_RS01445 (UIB01_01470) gshB 303419..304369 (-) 951 WP_038656180.1 glutathione synthase -
  UIB01_RS01450 (UIB01_01475) pilG 304606..305013 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  UIB01_RS01455 (UIB01_01480) pilH 305057..305422 (+) 366 WP_003297216.1 twitching motility response regulator PilH -
  UIB01_RS01460 (UIB01_01485) - 305464..306000 (+) 537 WP_038656183.1 chemotaxis protein CheW -
  UIB01_RS01465 (UIB01_01490) - 306080..308128 (+) 2049 WP_038665307.1 methyl-accepting chemotaxis protein -
  UIB01_RS01470 (UIB01_01495) - 308190..309056 (+) 867 WP_038665310.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=120128 UIB01_RS01450 WP_003282729.1 304606..305013(+) (pilG) [Stutzerimonas decontaminans strain 19SMN4]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=120128 UIB01_RS01450 WP_003282729.1 304606..305013(+) (pilG) [Stutzerimonas decontaminans strain 19SMN4]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAAAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCGCTCGCCAAGATTGCGGATACTCATCCCCGTA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGATGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGTCTGTTCGACAAGGCGAAAGGGCGTATTGTCGGCTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCCCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment