Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | NTHI477_RS07680 | Genome accession | NZ_CP007470 |
| Coordinates | 1569028..1569534 (-) | Length | 168 a.a. |
| NCBI ID | WP_011272049.1 | Uniprot ID | Q4QNA7 |
| Organism | Haemophilus influenzae strain 477 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1564028..1574534
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NTHI477_RS07650 (NTHI477_01544) | nudC | 1564521..1565315 (-) | 795 | WP_044332751.1 | NAD(+) diphosphatase | - |
| NTHI477_RS07655 (NTHI477_01545) | nfuA | 1565382..1565978 (-) | 597 | WP_005649300.1 | Fe-S biogenesis protein NfuA | - |
| NTHI477_RS07660 (NTHI477_01546) | - | 1566054..1566740 (-) | 687 | WP_011272045.1 | ComF family protein | - |
| NTHI477_RS07665 (NTHI477_01547) | pilQ | 1566753..1568090 (-) | 1338 | Protein_1488 | type IV pilus secretin PilQ | - |
| NTHI477_RS07670 (NTHI477_01549) | comD | 1568100..1568513 (-) | 414 | WP_011272047.1 | pilus assembly protein PilP | Machinery gene |
| NTHI477_RS07675 (NTHI477_01550) | comC | 1568510..1569031 (-) | 522 | WP_011272048.1 | competence protein ComC | Machinery gene |
| NTHI477_RS07680 (NTHI477_01551) | comB | 1569028..1569534 (-) | 507 | WP_011272049.1 | competence protein ComB | Machinery gene |
| NTHI477_RS07685 (NTHI477_01552) | comA | 1569535..1570332 (-) | 798 | WP_011272050.1 | pilus assembly protein PilM | Machinery gene |
| NTHI477_RS07690 (NTHI477_01553) | - | 1570431..1573025 (+) | 2595 | WP_042593320.1 | penicillin-binding protein 1A | - |
| NTHI477_RS07695 (NTHI477_01554) | - | 1573098..1573943 (+) | 846 | WP_011272052.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| NTHI477_RS07700 (NTHI477_01555) | - | 1574112..1574441 (+) | 330 | WP_005629464.1 | YbaB/EbfC family nucleoid-associated protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 19697.54 Da Isoelectric Point: 7.4684
>NTDB_id=119709 NTHI477_RS07680 WP_011272049.1 1569028..1569534(-) (comB) [Haemophilus influenzae strain 477]
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
Nucleotide
Download Length: 507 bp
>NTDB_id=119709 NTHI477_RS07680 WP_011272049.1 1569028..1569534(-) (comB) [Haemophilus influenzae strain 477]
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGTTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGTTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Haemophilus influenzae 86-028NP |
100 |
100 |
1 |
| comB | Haemophilus influenzae Rd KW20 |
98.81 |
100 |
0.988 |