Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   PJ18_RS06450 Genome accession   NZ_CP010307
Coordinates   1227355..1228008 (+) Length   217 a.a.
NCBI ID   WP_011049930.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain 00-6200     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1222355..1233008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJ18_RS06410 (PJ18_06410) - 1223092..1223322 (-) 231 WP_002787283.1 hypothetical protein -
  PJ18_RS06415 (PJ18_06415) - 1223288..1223551 (-) 264 WP_002787281.1 hypothetical protein -
  PJ18_RS06420 (PJ18_06420) - 1223608..1223895 (-) 288 WP_002787279.1 YopX family protein -
  PJ18_RS06425 (PJ18_06425) - 1223948..1224679 (-) 732 WP_011049928.1 phage regulatory protein/antirepressor Ant -
  PJ18_RS06430 (PJ18_06430) - 1225110..1225394 (-) 285 WP_002912332.1 hypothetical protein -
  PJ18_RS06435 (PJ18_06435) - 1225391..1225594 (-) 204 WP_002870299.1 hypothetical protein -
  PJ18_RS06440 (PJ18_06440) - 1225799..1226452 (+) 654 WP_002870336.1 hypothetical protein -
  PJ18_RS06445 (PJ18_06445) - 1226687..1227349 (+) 663 WP_002870274.1 S24/S26 family peptidase -
  PJ18_RS06450 (PJ18_06450) CJE1441 1227355..1228008 (+) 654 WP_011049930.1 DNA/RNA non-specific endonuclease Regulator
  PJ18_RS06455 (PJ18_06455) - 1228025..1228306 (+) 282 WP_002870263.1 PLDc N-terminal domain-containing protein -
  PJ18_RS08880 - 1228320..1228517 (-) 198 WP_002913413.1 hypothetical protein -
  PJ18_RS06460 (PJ18_06460) - 1228435..1228854 (-) 420 WP_002870261.1 hypothetical protein -
  PJ18_RS06465 (PJ18_06465) - 1229083..1229544 (-) 462 WP_002870260.1 DUF5675 family protein -
  PJ18_RS06470 (PJ18_06470) - 1229593..1230876 (-) 1284 WP_002788854.1 hypothetical protein -
  PJ18_RS06475 (PJ18_06475) - 1230873..1231247 (-) 375 WP_019108750.1 DUF1353 domain-containing protein -
  PJ18_RS06480 (PJ18_06480) - 1231240..1231623 (-) 384 WP_002869963.1 hypothetical protein -
  PJ18_RS06485 (PJ18_06485) - 1231620..1232255 (-) 636 WP_002789149.1 DUF4376 domain-containing protein -
  PJ18_RS06490 (PJ18_06490) - 1232268..1232717 (-) 450 WP_002798141.1 hypothetical protein -

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 25531.02 Da        Isoelectric Point: 9.8742

>NTDB_id=119705 PJ18_RS06450 WP_011049930.1 1227355..1228008(+) (CJE1441) [Campylobacter jejuni subsp. jejuni strain 00-6200]
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF

Nucleotide


Download         Length: 654 bp        

>NTDB_id=119705 PJ18_RS06450 WP_011049930.1 1227355..1228008(+) (CJE1441) [Campylobacter jejuni subsp. jejuni strain 00-6200]
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATATTAATTGTTATGATTATTCTTTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAAAAACAATATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAAT
GTGACAATTTTTAA

Domains

Predicted by InterProScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

100

100

1
  CJE0566 Campylobacter jejuni RM1221

91.163

99.078

0.903

Multiple sequence alignment