Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CH52_RS08860 | Genome accession | NZ_CP007454 |
| Coordinates | 1764371..1764766 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 502A isolate RN6607 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1759371..1769766
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH52_RS08830 (CH52_08450) | - | 1760629..1761033 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CH52_RS08835 | - | 1761371..1761463 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| CH52_RS08840 (CH52_08455) | - | 1761595..1761828 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CH52_RS08845 (CH52_08460) | murA | 1761939..1763204 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CH52_RS08850 (CH52_08465) | fabZ | 1763238..1763678 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CH52_RS08855 (CH52_08470) | - | 1763737..1764177 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| CH52_RS08860 (CH52_08475) | ssb | 1764371..1764766 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CH52_RS08865 (CH52_08480) | sceD | 1765155..1765850 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| CH52_RS08875 (CH52_08485) | tenA | 1766237..1766926 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| CH52_RS08880 (CH52_08490) | thiD | 1766919..1767749 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CH52_RS08885 (CH52_08495) | thiM | 1767733..1768524 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| CH52_RS08890 (CH52_08500) | thiE | 1768526..1769167 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=119490 CH52_RS08860 WP_000932694.1 1764371..1764766(+) (ssb) [Staphylococcus aureus strain 502A isolate RN6607]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=119490 CH52_RS08860 WP_000932694.1 1764371..1764766(+) (ssb) [Staphylococcus aureus strain 502A isolate RN6607]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |