Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   CH92_RS19315 Genome accession   NZ_CP007441
Coordinates   4255738..4256145 (-) Length   135 a.a.
NCBI ID   WP_019339789.1    Uniprot ID   A0A653VR38
Organism   Stutzerimonas stutzeri strain 28a24     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 4250738..4261145
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CH92_RS19295 (CH92_19720) - 4251704..4252570 (-) 867 WP_025243400.1 CheR family methyltransferase -
  CH92_RS19300 (CH92_19725) - 4252630..4254678 (-) 2049 WP_025243401.1 methyl-accepting chemotaxis protein -
  CH92_RS19305 (CH92_19730) - 4254758..4255294 (-) 537 WP_025243402.1 chemotaxis protein CheW -
  CH92_RS19310 (CH92_19735) pilH 4255328..4255693 (-) 366 WP_021206021.1 twitching motility response regulator PilH -
  CH92_RS19315 (CH92_19740) pilG 4255738..4256145 (-) 408 WP_019339789.1 twitching motility response regulator PilG Regulator
  CH92_RS19320 (CH92_19745) gshB 4256382..4257344 (+) 963 WP_025243403.1 glutathione synthase -
  CH92_RS19325 (CH92_19750) - 4257542..4258438 (+) 897 WP_025243404.1 energy transducer TonB -
  CH92_RS19330 (CH92_19755) - 4258532..4259101 (+) 570 WP_025243405.1 YqgE/AlgH family protein -
  CH92_RS19335 (CH92_19760) ruvX 4259098..4259523 (+) 426 WP_025243406.1 Holliday junction resolvase RuvX -
  CH92_RS19340 (CH92_19765) pyrR 4259544..4260056 (+) 513 WP_025243407.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CH92_RS19345 (CH92_19770) - 4260067..4261083 (+) 1017 WP_025243408.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14840.24 Da        Isoelectric Point: 7.2439

>NTDB_id=119366 CH92_RS19315 WP_019339789.1 4255738..4256145(-) (pilG) [Stutzerimonas stutzeri strain 28a24]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADSHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=119366 CH92_RS19315 WP_019339789.1 4255738..4256145(-) (pilG) [Stutzerimonas stutzeri strain 28a24]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACGCTGCT
GAAGAAAGTAGGTTGTGATGTGATCACGGCGGTGGATGGCTTCGATGCGCTCGCCAAAATCGCGGATAGCCACCCGCGCA
TCATTTTCGTCGATATCATGATGCCGAGGCTTGATGGCTATCAGACCTGTGCGCTGATTAAGAACAACAGTTCTTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCTAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGGATCGTGGGGTCGGATCAGTA
CCTCACCAAGCCTTTCAGCAAAGAAGAGTTGCTCGGTGCTATCAAGGCGCATGTGCCTGATTTCGCACCGGTAGAGCAAG
TATCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A653VR38

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment