Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   KHU1_RS04560 Genome accession   NZ_CP007242
Coordinates   912153..913106 (+) Length   317 a.a.
NCBI ID   WP_007409125.1    Uniprot ID   A7Z3B8
Organism   Bacillus amyloliquefaciens KHG19     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 907153..918106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KHU1_RS04530 (KHU1_0865) argF 908971..909942 (+) 972 WP_032871181.1 ornithine carbamoyltransferase -
  KHU1_RS04535 (KHU1_0866) - 910018..910197 (+) 180 WP_003155070.1 YjzC family protein -
  KHU1_RS04540 (KHU1_0867) - 910234..910419 (-) 186 WP_007409129.1 YjzD family protein -
  KHU1_RS04550 (KHU1_0869) - 910680..911414 (+) 735 WP_007409127.1 hypothetical protein -
  KHU1_RS04555 (KHU1_0870) - 911497..912063 (+) 567 WP_007409126.1 hypothetical protein -
  KHU1_RS04560 (KHU1_0871) med 912153..913106 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  KHU1_RS04565 (KHU1_0872) comZ 913119..913310 (+) 192 WP_042635050.1 ComZ family protein Regulator
  KHU1_RS04570 (KHU1_0873) - 913339..913557 (-) 219 WP_007409123.1 hypothetical protein -
  KHU1_RS04575 (KHU1_0874) - 913724..914662 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  KHU1_RS04580 (KHU1_0875) fabF 914685..915923 (+) 1239 WP_020955629.1 beta-ketoacyl-ACP synthase II -
  KHU1_RS04585 (KHU1_0876) - 916006..916791 (+) 786 WP_042635051.1 DUF2268 domain-containing protein -
  KHU1_RS04590 (KHU1_0877) - 916965..917951 (+) 987 WP_007409119.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35342.99 Da        Isoelectric Point: 4.6686

>NTDB_id=118125 KHU1_RS04560 WP_007409125.1 912153..913106(+) (med) [Bacillus amyloliquefaciens KHG19]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=118125 KHU1_RS04560 WP_007409125.1 912153..913106(+) (med) [Bacillus amyloliquefaciens KHG19]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z3B8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785

Multiple sequence alignment