Detailed information NTG0117217

Bioinformatically predicted

Overview

• Name: CJE0566
• Type: Regulator
• Locus tag: YSQ_RS06555
• Genome accession: NZ_CP007183
• Coordinates: 1275521..1276183 (-)
• Length: 220 a.a.
• NCBI ID: WP_025443331.1
• Uniprot ID: -
• Organism: Campylobacter coli RM1875
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1270521..1281183

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YSQ_RS06515 (YSQ_06695)	-	1270718..1271164 (-)	447	WP_002840683.1	hypothetical protein	-
YSQ_RS06520 (YSQ_06700)	-	1271154..1271549 (-)	396	WP_002840681.1	hypothetical protein	-
YSQ_RS06525 (YSQ_06705)	-	1271551..1271943 (-)	393	WP_002840679.1	hypothetical protein	-
YSQ_RS06530 (YSQ_06710)	-	1271960..1272805 (-)	846	WP_025443330.1	BspA family leucine-rich repeat surface protein	-
YSQ_RS06535 (YSQ_06715)	-	1272820..1273824 (-)	1005	WP_002840640.1	toxic anion resistance protein	-
YSQ_RS06540 (YSQ_06720)	-	1273983..1274678 (+)	696	WP_002840257.1	SEL1-like repeat protein	-
YSQ_RS06545 (YSQ_06725)	-	1274690..1274965 (-)	276	WP_002840259.1	hypothetical protein	-
YSQ_RS06550 (YSQ_06730)	-	1274952..1275455 (-)	504	WP_002840261.1	Panacea domain-containing protein	-
YSQ_RS06555 (YSQ_06735)	CJE0566	1275521..1276183 (-)	663	WP_025443331.1	DNA/RNA non-specific endonuclease	Regulator
YSQ_RS06560 (YSQ_06740)	-	1276202..1276864 (-)	663	WP_002840458.1	hypothetical protein	-
YSQ_RS06565 (YSQ_06750)	-	1276948..1277292 (-)	345	WP_002815123.1	hypothetical protein	-
YSQ_RS06570 (YSQ_06755)	-	1277289..1277603 (-)	315	WP_002840386.1	hypothetical protein	-
YSQ_RS10480	-	1277803..1278555 (-)	753	WP_002840388.1	YopX family protein	-
YSQ_RS06585 (YSQ_06775)	-	1278738..1279088 (-)	351	WP_002840065.1	hypothetical protein	-
YSQ_RS06590 (YSQ_06780)	-	1279085..1279276 (-)	192	WP_002840066.1	hypothetical protein	-
YSQ_RS06595 (YSQ_06785)	-	1279278..1279910 (-)	633	WP_002840067.1	hypothetical protein	-
YSQ_RS06600 (YSQ_06790)	-	1279916..1280266 (-)	351	WP_002840068.1	hypothetical protein	-
YSQ_RS06605 (YSQ_06795)	-	1280266..1280649 (-)	384	WP_002840069.1	YopX family protein	-
YSQ_RS06610 (YSQ_06800)	-	1280630..1280911 (-)	282	WP_023890875.1	hypothetical protein	-

Sequence

Protein

• Length: 220 a.a.
• Molecular weight: 25727.33 Da
• Isoelectric Point: 9.9023

>NTDB_id=117217 YSQ_RS06555 WP_025443331.1 1275521..1276183(-) (CJE0566) [Campylobacter coli RM1875]
MKKLMILPLLATLALADYTQYKPSEDFAKYFTKQSCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQAALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHKVENENIKNYKVNCDILTGS

Nucleotide

• Length: 663 bp

>NTDB_id=117217 YSQ_RS06555 WP_025443331.1 1275521..1276183(-) (CJE0566) [Campylobacter coli RM1875]
ATGAAAAAACTTATGATTTTACCGTTGCTAGCAACTCTAGCCTTAGCTGATTATACTCAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCACAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGCAGCTTTGAAGCTTGGAAGTTTAGAAGTTTTA
AATTTAGTTAATTATGATAACAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAATCATAAAGTAGAAAATGAGAATATAAAAAATTATAAGGTTAATT
GTGATATTTTAACCGGAAGTTGA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (27-215)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
CJE0566	Campylobacter jejuni RM1221	91.628	97.727	0.895
CJE1441	Campylobacter jejuni RM1221	90.698	97.727	0.886