Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DYB47_RS09545 Genome accession   NZ_UHFV01000002
Coordinates   1917026..1917793 (+) Length   255 a.a.
NCBI ID   WP_003078711.1    Uniprot ID   G5JXJ9
Organism   Streptococcus macacae NCTC 11558     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1912026..1922793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DYB47_RS09510 (NCTC11558_01929) tnpA 1913222..1913617 (-) 396 WP_003080128.1 IS200/IS605 family transposase -
  DYB47_RS09530 (NCTC11558_01933) - 1914223..1914894 (-) 672 WP_003082423.1 YoaK family protein -
  DYB47_RS09535 (NCTC11558_01934) rlmH 1914959..1915438 (-) 480 WP_003079652.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DYB47_RS09540 (NCTC11558_01935) htrA 1915607..1916812 (+) 1206 WP_003081517.1 S1C family serine protease Regulator
  DYB47_RS09545 (NCTC11558_01936) spo0J 1917026..1917793 (+) 768 WP_003078711.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29120.64 Da        Isoelectric Point: 9.8923

>NTDB_id=1171345 DYB47_RS09545 WP_003078711.1 1917026..1917793(+) (spo0J) [Streptococcus macacae NCTC 11558]
MSEELQYINYKDINSNPYQPRLHFEENELKELAQSIKENGLIQPIIVRKSSVFGYELIAGERRLKALKMAGINKVPAIIK
ELSDNDSMKQAIIENLQRSDLTPIEEARAYQNLVIKNQMTHDEIANVIGKSRPYITNSIRLLNLPSNISQALEKGIISQG
HARLLLGIEEKNEQEKWFQKIINENLSVRQMEKALKKVKKSPKIIKDIFISEKEKELSKSLGLTVSISYNKKGKGAVKIS
FSSEDEFNNLINKLN

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1171345 DYB47_RS09545 WP_003078711.1 1917026..1917793(+) (spo0J) [Streptococcus macacae NCTC 11558]
ATGTCTGAAGAACTCCAATATATAAATTACAAAGATATTAATTCCAACCCTTATCAACCAAGACTTCATTTTGAAGAAAA
TGAACTAAAAGAACTTGCACAATCTATTAAAGAAAATGGTTTAATTCAACCCATTATAGTCAGAAAATCATCTGTTTTTG
GATATGAATTAATCGCAGGAGAAAGACGGCTAAAAGCGCTTAAAATGGCAGGTATTAATAAAGTACCTGCTATTATAAAA
GAATTATCTGATAACGACAGTATGAAACAGGCTATTATTGAAAATTTACAACGTTCAGATCTTACTCCTATTGAAGAAGC
CAGAGCTTATCAGAATCTGGTTATCAAAAATCAGATGACCCACGATGAAATTGCCAATGTCATAGGAAAATCCAGACCCT
ATATCACAAATAGTATCAGATTATTAAATTTGCCTTCTAACATTAGCCAAGCACTTGAAAAAGGAATAATCTCACAAGGC
CACGCACGATTACTTTTAGGTATTGAAGAGAAAAATGAACAAGAAAAATGGTTTCAAAAAATTATTAATGAAAATTTAAG
TGTAAGACAAATGGAAAAAGCTCTAAAGAAGGTAAAAAAATCTCCCAAAATCATAAAGGATATTTTTATATCTGAAAAAG
AAAAAGAGCTTAGCAAATCATTAGGTTTAACTGTATCTATTTCTTATAACAAAAAAGGAAAAGGGGCTGTAAAAATTAGC
TTTTCTTCAGAAGACGAATTTAACAATTTAATAAACAAGCTGAATTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-196)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5JXJ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

73.828

100

0.741

Multiple sequence alignment