Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | DYB47_RS04715 | Genome accession | NZ_UHFV01000002 |
| Coordinates | 894196..895428 (+) | Length | 410 a.a. |
| NCBI ID | WP_003082210.1 | Uniprot ID | G5JU49 |
| Organism | Streptococcus macacae NCTC 11558 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 889196..900428
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYB47_RS04690 (NCTC11558_00946) | - | 889767..891035 (-) | 1269 | WP_003079188.1 | hydroxymethylglutaryl-CoA reductase, degradative | - |
| DYB47_RS04695 (NCTC11558_00947) | - | 891038..892213 (-) | 1176 | WP_040841478.1 | hydroxymethylglutaryl-CoA synthase | - |
| DYB47_RS04700 (NCTC11558_00948) | - | 892378..893217 (+) | 840 | WP_003080244.1 | thymidylate synthase | - |
| DYB47_RS04705 (NCTC11558_00949) | - | 893474..893986 (+) | 513 | WP_040841742.1 | dihydrofolate reductase | - |
| DYB47_RS04710 (NCTC11558_00950) | - | 894004..894174 (+) | 171 | WP_003080977.1 | hypothetical protein | - |
| DYB47_RS04715 (NCTC11558_00951) | clpX | 894196..895428 (+) | 1233 | WP_003082210.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| DYB47_RS04720 (NCTC11558_00952) | yihA | 895440..896039 (+) | 600 | WP_003081520.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| DYB47_RS04725 (NCTC11558_00953) | - | 896369..897745 (+) | 1377 | WP_003078571.1 | amino acid permease | - |
| DYB47_RS04730 (NCTC11558_00954) | mmuM | 897755..898726 (+) | 972 | WP_003081788.1 | homocysteine S-methyltransferase | - |
| DYB47_RS04735 (NCTC11558_00955) | - | 898800..900083 (-) | 1284 | WP_003078999.1 | PLP-dependent aminotransferase family protein | - |
Sequence
Protein
Download Length: 410 a.a. Molecular weight: 45302.77 Da Isoelectric Point: 4.4553
>NTDB_id=1171315 DYB47_RS04715 WP_003082210.1 894196..895428(+) (clpX) [Streptococcus macacae NCTC 11558]
MAGNRTNDVTVHCSFCGKNQDEVKKIIAGNGVFICNECVELSQEIIREELAEDILADLSEVPKPKELLDILDSYVIGQDR
AKRALAVAVYNHYKRISFTESQEEDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENI
LLKLIQAADYNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSKKIDEKSSYMQEIISEDIQKFGLIPEFIGRLPVLAALEQLTVEDLVRI
LTEPKNALVKQYKTLLSYDGVELEFDQEALEAIAQKAIERKTGARGLRSIIEETMLDLMFEIPSQEEVTHVRITKAAVEG
NDKPILETAS
MAGNRTNDVTVHCSFCGKNQDEVKKIIAGNGVFICNECVELSQEIIREELAEDILADLSEVPKPKELLDILDSYVIGQDR
AKRALAVAVYNHYKRISFTESQEEDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENI
LLKLIQAADYNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSKKIDEKSSYMQEIISEDIQKFGLIPEFIGRLPVLAALEQLTVEDLVRI
LTEPKNALVKQYKTLLSYDGVELEFDQEALEAIAQKAIERKTGARGLRSIIEETMLDLMFEIPSQEEVTHVRITKAAVEG
NDKPILETAS
Nucleotide
Download Length: 1233 bp
>NTDB_id=1171315 DYB47_RS04715 WP_003082210.1 894196..895428(+) (clpX) [Streptococcus macacae NCTC 11558]
ATGGCTGGAAATAGAACTAATGATGTCACAGTACACTGTTCATTTTGTGGTAAAAACCAAGATGAAGTCAAAAAAATCAT
TGCAGGAAACGGTGTGTTTATCTGTAATGAATGTGTTGAGTTATCCCAAGAAATTATCCGTGAAGAATTGGCAGAAGATA
TCCTAGCTGATCTGTCAGAGGTTCCTAAACCTAAGGAGCTGCTGGATATTTTAGATAGCTATGTTATCGGCCAAGATCGA
GCAAAACGCGCTTTAGCAGTAGCAGTTTATAACCACTACAAACGTATCAGCTTTACAGAAAGCCAAGAAGAAGACGATGT
TGATTTGCAAAAATCAAATATCTTAATGATTGGCCCAACGGGTTCTGGCAAGACTTTTTTAGCTCAAACGTTAGCTAAAA
GCCTTAACGTACCTTTTGCTATCGCTGATGCAACAGCTCTGACTGAAGCAGGCTATGTTGGAGAAGATGTCGAAAATATT
CTTTTGAAATTGATTCAAGCAGCAGATTATAATATTGAACGTGCAGAACGCGGTATTATCTATGTGGATGAAATTGATAA
GATAGCTAAAAAAGGCGAAAATGTTTCCATTACACGTGATGTCTCCGGCGAAGGCGTTCAGCAAGCTCTATTAAAAATTA
TTGAAGGTACTGTAGCCAGTGTCCCTCCTCAAGGCGGACGCAAGCACCCACAGCAAGAGATGATTCAGATTGATACAAAA
AATATTCTCTTTATCGTTGGCGGTGCCTTTGATGGTATTGAAGAGATTGTCAAACAGCGTTTGGGAGAAAAAATTATTGG
ATTTGGTCAGAATAGTAAAAAGATTGATGAAAAATCTTCTTATATGCAAGAAATTATTTCTGAAGACATCCAAAAGTTTG
GACTAATTCCTGAATTTATTGGCCGCCTGCCTGTTTTAGCAGCGCTGGAGCAGTTAACTGTTGAGGATTTGGTGCGTATT
TTAACAGAACCTAAAAATGCTTTGGTAAAACAATATAAAACGCTCTTATCCTATGATGGTGTCGAGTTGGAATTTGACCA
GGAAGCTCTTGAGGCCATCGCACAAAAAGCCATCGAACGAAAAACTGGAGCACGCGGACTTAGATCTATAATTGAAGAAA
CAATGCTTGATTTGATGTTTGAAATCCCAAGTCAGGAAGAAGTGACGCATGTTCGGATAACGAAAGCGGCAGTCGAAGGT
AATGATAAACCTATTCTTGAGACGGCGTCTTAA
ATGGCTGGAAATAGAACTAATGATGTCACAGTACACTGTTCATTTTGTGGTAAAAACCAAGATGAAGTCAAAAAAATCAT
TGCAGGAAACGGTGTGTTTATCTGTAATGAATGTGTTGAGTTATCCCAAGAAATTATCCGTGAAGAATTGGCAGAAGATA
TCCTAGCTGATCTGTCAGAGGTTCCTAAACCTAAGGAGCTGCTGGATATTTTAGATAGCTATGTTATCGGCCAAGATCGA
GCAAAACGCGCTTTAGCAGTAGCAGTTTATAACCACTACAAACGTATCAGCTTTACAGAAAGCCAAGAAGAAGACGATGT
TGATTTGCAAAAATCAAATATCTTAATGATTGGCCCAACGGGTTCTGGCAAGACTTTTTTAGCTCAAACGTTAGCTAAAA
GCCTTAACGTACCTTTTGCTATCGCTGATGCAACAGCTCTGACTGAAGCAGGCTATGTTGGAGAAGATGTCGAAAATATT
CTTTTGAAATTGATTCAAGCAGCAGATTATAATATTGAACGTGCAGAACGCGGTATTATCTATGTGGATGAAATTGATAA
GATAGCTAAAAAAGGCGAAAATGTTTCCATTACACGTGATGTCTCCGGCGAAGGCGTTCAGCAAGCTCTATTAAAAATTA
TTGAAGGTACTGTAGCCAGTGTCCCTCCTCAAGGCGGACGCAAGCACCCACAGCAAGAGATGATTCAGATTGATACAAAA
AATATTCTCTTTATCGTTGGCGGTGCCTTTGATGGTATTGAAGAGATTGTCAAACAGCGTTTGGGAGAAAAAATTATTGG
ATTTGGTCAGAATAGTAAAAAGATTGATGAAAAATCTTCTTATATGCAAGAAATTATTTCTGAAGACATCCAAAAGTTTG
GACTAATTCCTGAATTTATTGGCCGCCTGCCTGTTTTAGCAGCGCTGGAGCAGTTAACTGTTGAGGATTTGGTGCGTATT
TTAACAGAACCTAAAAATGCTTTGGTAAAACAATATAAAACGCTCTTATCCTATGATGGTGTCGAGTTGGAATTTGACCA
GGAAGCTCTTGAGGCCATCGCACAAAAAGCCATCGAACGAAAAACTGGAGCACGCGGACTTAGATCTATAATTGAAGAAA
CAATGCTTGATTTGATGTTTGAAATCCCAAGTCAGGAAGAAGTGACGCATGTTCGGATAACGAAAGCGGCAGTCGAAGGT
AATGATAAACCTATTCTTGAGACGGCGTCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
95.366 |
100 |
0.954 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.603 |
97.805 |
0.573 |