Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AZ30_RS08240 | Genome accession | NZ_CP007176 |
| Coordinates | 1660392..1660691 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus USA300-ISMMS1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1655392..1665691
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZ30_RS08215 (AZ30_07830) | gcvPA | 1656604..1657950 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| AZ30_RS08220 (AZ30_07835) | gcvT | 1657970..1659061 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AZ30_RS08225 (AZ30_07840) | - | 1659220..1659744 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| AZ30_RS08230 | - | 1659734..1659880 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| AZ30_RS08235 | comGF | 1659977..1660474 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AZ30_RS08240 (AZ30_07850) | comGE | 1660392..1660691 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AZ30_RS08245 (AZ30_07855) | comGD | 1660678..1661124 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AZ30_RS08250 (AZ30_07860) | comGC | 1661102..1661413 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AZ30_RS08255 (AZ30_07865) | comGB | 1661427..1662497 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AZ30_RS08260 (AZ30_07870) | comGA | 1662469..1663443 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AZ30_RS08265 (AZ30_07875) | - | 1663495..1664118 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| AZ30_RS08270 (AZ30_07880) | - | 1664115..1664444 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AZ30_RS08275 (AZ30_07885) | - | 1664444..1665430 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AZ30_RS08280 (AZ30_07890) | - | 1665427..1665630 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=117127 AZ30_RS08240 WP_000844413.1 1660392..1660691(-) (comGE) [Staphylococcus aureus USA300-ISMMS1]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=117127 AZ30_RS08240 WP_000844413.1 1660392..1660691(-) (comGE) [Staphylococcus aureus USA300-ISMMS1]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |