Detailed information NTG0117056

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AW03_RS12530
• Genome accession: NZ_CP007173
• Coordinates: 2439889..2442219 (-)
• Length: 776 a.a.
• NCBI ID: WP_041517945.1
• Uniprot ID: -
• Organism: Bacillus subtilis HJ5
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2434889..2447219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AW03_RS12500 (AW03_024100)	yqxA	2435228..2435566 (-)	339	WP_014477382.1	YqxA family protein	-
AW03_RS12505 (AW03_024110)	spoIIP	2435583..2436788 (-)	1206	WP_015384129.1	spore autolysin SpoIIP	-
AW03_RS12510 (AW03_024120)	gpr	2436851..2437957 (-)	1107	WP_014480309.1	GPR endopeptidase	-
AW03_RS12515 (AW03_024130)	rpsT	2438161..2438427 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
AW03_RS12520 (AW03_024150)	holA	2438442..2439485 (-)	1044	WP_015384130.1	DNA polymerase III subunit delta	-
AW03_RS21700	-	2439525..2439674 (-)	150	WP_003229985.1	hypothetical protein	-
AW03_RS21235 (AW03_024160)	yqzM	2439715..2439849 (+)	135	WP_003229983.1	YqzM family protein	-
AW03_RS12530 (AW03_024170)	comEC	2439889..2442219 (-)	2331	WP_041517945.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AW03_RS12535 (AW03_024180)	comEB	2442223..2442792 (-)	570	WP_003229978.1	ComE operon protein 2	-
AW03_RS12540 (AW03_024190)	comEA	2442859..2443476 (-)	618	WP_015384132.1	competence protein ComEA	Machinery gene
AW03_RS12545 (AW03_024200)	comER	2443560..2444381 (+)	822	WP_004398597.1	late competence protein ComER	-
AW03_RS12550 (AW03_024210)	yqeM	2444447..2445190 (-)	744	WP_015384134.1	class I SAM-dependent methyltransferase	-
AW03_RS12555 (AW03_024220)	rsfS	2445187..2445543 (-)	357	WP_014480315.1	ribosome silencing factor	-
AW03_RS12560 (AW03_024230)	yqeK	2445561..2446121 (-)	561	WP_015483448.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AW03_RS12565 (AW03_024240)	nadD	2446111..2446680 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
AW03_RS12570 (AW03_024250)	yhbY	2446692..2446982 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86647.97 Da
• Isoelectric Point: 6.8607

>NTDB_id=117056 AW03_RS12530 WP_041517945.1 2439889..2442219(-) (comEC) [Bacillus subtilis HJ5]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDNIPKIDGDRMSMMVETPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGAASSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTSLGQLTIVSLIAQLGSLPILLYHFHKFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVDVFTIMIAHPAPVLLFLFTVTILLLLMAIEKRSLSQLMVTGG
ICCTVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKYHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFTQQLQPETAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRGGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=117056 AW03_RS12530 WP_041517945.1 2439889..2442219(-) (comEC) [Bacillus subtilis HJ5]
ATGCGTAATTCGCGATTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACTTATCAATTC
AAGGCAGTGATTGACAATATTCCTAAAATTGACGGCGACCGTATGTCTATGATGGTTGAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGCGAACCTGAAAATTTCAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGGATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAAGATGAAGTGCTTACTGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCAATATCAGGGCTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATACGCCTTGGTATAACAAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTTCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGCCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCAGCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATAAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCTGATGTTGATGTATTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTCACGATCCTCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACTGGAGGC
ATTTGCTGCACGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGTATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
GCACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCACCCAACAGCTTCAGCCGGAAACGGCCATTATCTCAGCTGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGGTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	97.809	100	0.978