Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACLV7W_RS08715 Genome accession   NZ_OZ217346
Coordinates   1796234..1796965 (-) Length   243 a.a.
NCBI ID   WP_000889954.1    Uniprot ID   F9HLZ7
Organism   Streptococcus mitis isolate S. mitis D22     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1791234..1801965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7W_RS08685 (SMID22_17910) blpC 1791885..1792040 (+) 156 WP_223340333.1 quorum-sensing system pheromone BlpC -
  ACLV7W_RS08690 (SMID22_17920) - 1792085..1793425 (-) 1341 WP_261029338.1 sensor histidine kinase -
  ACLV7W_RS08695 (SMID22_17930) comE/blpR 1793439..1794176 (-) 738 WP_411865819.1 response regulator transcription factor Regulator
  ACLV7W_RS08700 (SMID22_17940) - 1794181..1794519 (-) 339 WP_125393115.1 LytTR family DNA-binding domain-containing protein -
  ACLV7W_RS08705 (SMID22_17950) - 1794796..1795125 (+) 330 WP_411865820.1 helicase BlpT -
  ACLV7W_RS08710 (SMID22_17960) - 1795188..1796237 (-) 1050 WP_411865821.1 ABC transporter permease -
  ACLV7W_RS08715 (SMID22_17970) pptA 1796234..1796965 (-) 732 WP_000889954.1 ABC transporter ATP-binding protein Regulator
  ACLV7W_RS08720 (SMID22_17980) - 1797033..1797443 (+) 411 WP_001278317.1 HIT family protein -
  ACLV7W_RS08725 (SMID22_17990) - 1797453..1797740 (+) 288 WP_411865822.1 hypothetical protein -
  ACLV7W_RS08730 (SMID22_18000) dnaJ 1798080..1799216 (-) 1137 WP_001066308.1 molecular chaperone DnaJ -
  ACLV7W_RS08735 (SMID22_18010) dnaK 1799689..1801512 (-) 1824 WP_261117559.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27098.58 Da        Isoelectric Point: 4.6989

>NTDB_id=1170458 ACLV7W_RS08715 WP_000889954.1 1796234..1796965(-) (pptA) [Streptococcus mitis isolate S. mitis D22]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGSININGLTLQEDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFDRVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1170458 ACLV7W_RS08715 WP_000889954.1 1796234..1796965(-) (pptA) [Streptococcus mitis isolate S. mitis D22]
ATGTTAGAAATTAAAAATCTGACAGGTGGCTATGTCCATGTCCCTGTCTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGTAAATCGACGACAATCAATGAGATTATTGGTCTGTTGACACCTT
ATAGTGGCTCCATCAATATCAATGGCTTGACCCTGCAAGAAGATGCAACGAGCTACCGCAAGCAAATAGGCTACATTCCT
GAAACACCTAGCTTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCCATGGCTTATGGTATTGAGCAGAA
AGTGGCTTTTGATCGAGTAGAACCCTTGTTAAAAATGTTCCGTCTGGACCAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCGAGTCTTTTCATTGTGGATGAGCCTTTC
CTTGGGCTCGATCCGCTGGCTATTGCAGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAAGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCTGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAGG
GAAATCTCCTGCAACTGCGCGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9HLZ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712

Multiple sequence alignment