Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACLV7W_RS01260 Genome accession   NZ_OZ217346
Coordinates   253454..254491 (+) Length   345 a.a.
NCBI ID   WP_153209763.1    Uniprot ID   A0A6I1UE14
Organism   Streptococcus mitis isolate S. mitis D22     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 248454..259491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7W_RS01225 (SMID22_02460) yidC 248490..249416 (-) 927 WP_000835964.1 membrane protein insertase YidC -
  ACLV7W_RS01230 (SMID22_02470) - 249494..249772 (-) 279 WP_001174612.1 acylphosphatase -
  ACLV7W_RS01235 (SMID22_02480) - 249806..250546 (+) 741 WP_411865284.1 TrmH family RNA methyltransferase -
  ACLV7W_RS01240 (SMID22_02490) - 250601..251284 (+) 684 WP_261065701.1 Bax inhibitor-1/YccA family protein -
  ACLV7W_RS01245 (SMID22_02500) asnA 251396..252388 (+) 993 WP_261077987.1 aspartate--ammonia ligase -
  ACLV7W_RS01250 (SMID22_02510) rsmD 252453..252992 (+) 540 WP_261077988.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACLV7W_RS01255 (SMID22_02520) coaD 252982..253470 (+) 489 WP_153209764.1 pantetheine-phosphate adenylyltransferase -
  ACLV7W_RS01260 (SMID22_02530) sepM 253454..254491 (+) 1038 WP_153209763.1 SepM family pheromone-processing serine protease Regulator
  ACLV7W_RS01265 (SMID22_02540) - 254548..254778 (+) 231 WP_153209762.1 DUF1146 family protein -
  ACLV7W_RS01270 (SMID22_02550) - 254840..255868 (+) 1029 WP_411865285.1 acyltransferase family protein -
  ACLV7W_RS01275 (SMID22_02560) murA 255895..257178 (+) 1284 WP_045612767.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ACLV7W_RS01280 (SMID22_02570) - 257171..257359 (+) 189 WP_004241151.1 DNA-directed RNA polymerase subunit beta -
  ACLV7W_RS01285 (SMID22_02580) endA 257398..258222 (+) 825 WP_078237947.1 DNA-entry nuclease EndA Machinery gene

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 4.8665

>NTDB_id=1170414 ACLV7W_RS01260 WP_153209763.1 253454..254491(+) (sepM) [Streptococcus mitis isolate S. mitis D22]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVNSQKLGDSVKVTYEEDGQTKSAEGKIIALENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASAREGAAIFFAPDNPISEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1170414 ACLV7W_RS01260 WP_153209763.1 253454..254491(+) (sepM) [Streptococcus mitis isolate S. mitis D22]
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCAGCCTTAATTGTGACTTTCTTGGCATTTGTAGTGCCCTTACC
CTACTATATAGAAGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GGGCCTATCAATTCGTTACGGTTGGTGTACAGCACGCTACTTTAGCCCATATGATTTATGCATGGTTGACGCCTTTTACA
GATATTCGTAGCGCTCAAGAGACTACAGGTGGTTCTTCCGATGTGGAATTTATGCGGATTAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCTAAGTATCAAGGGCTAAAAACAGCTGGTAAGGATATTGAATTAAAATATCTTGGGGTTTATGTTT
TGACTGTGACAGATAATTCGACCTTTAAAGGGATTCTTAACATCTCTGATACGGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGATTTGATTGATTATGTCAATTCTCAAAAATTAGGGGACTCAGTCAAGGTAACTTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGTAAGATTATCGCCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAAGTGACCAGTGATGTCCCAATTCGCTTTTCAACAGCTGGTATCGGCGGTCCAAGTGCAGGTCTCATGTTTAGTCTG
GCCATCTATACCCAAATAGCTGACCCAGGTCTTCGTAATGGCCGCATTGTTGCCGGTACAGGCACCATTGACCGAGATGG
TAATGTGGGAGACATTGGAGGTATCGATAAGAAAGTTGTAGCTTCGGCTAGAGAAGGTGCTGCTATTTTCTTTGCCCCTG
ATAACCCTATTAGCGAAGAAGAACAAAAAGCACATCCTGATGCGAAAAATAACTACCAAACAGCCTTGGAAGCAGCTAAA
ACAATCAAGACAGATATGAAAATCGTGCCTGTTAAAACCCTACAAGATGCAATTGATTACTTGAAAAACAATCCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I1UE14

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.357

99.13

0.588


Multiple sequence alignment