Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ACLV7D_RS10010 | Genome accession | NZ_OZ217345 |
| Coordinates | 2104856..2107288 (-) | Length | 810 a.a. |
| NCBI ID | WP_173218772.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis F22 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2099856..2112288
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV7D_RS09995 (SMIF22_19830) | - | 2101644..2102171 (-) | 528 | WP_112444694.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| ACLV7D_RS10000 (SMIF22_19840) | - | 2102339..2103682 (-) | 1344 | WP_112444692.1 | HAMP domain-containing sensor histidine kinase | - |
| ACLV7D_RS10005 (SMIF22_19850) | rr06 | 2103679..2104332 (-) | 654 | WP_050112022.1 | two-component system response regulator RR06 | - |
| ACLV7D_RS10010 (SMIF22_19860) | clpC | 2104856..2107288 (-) | 2433 | WP_173218772.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| ACLV7D_RS10015 (SMIF22_19870) | - | 2107290..2107748 (-) | 459 | WP_112444684.1 | CtsR family transcriptional regulator | - |
| ACLV7D_RS10020 (SMIF22_19880) | - | 2107867..2108595 (-) | 729 | WP_000136220.1 | ABC transporter ATP-binding protein | - |
| ACLV7D_RS10025 (SMIF22_19890) | - | 2108595..2109602 (-) | 1008 | WP_112444682.1 | ABC transporter substrate-binding protein | - |
| ACLV7D_RS10030 (SMIF22_19900) | - | 2109641..2110399 (-) | 759 | WP_166736901.1 | ABC transporter permease | - |
| ACLV7D_RS10035 (SMIF22_19910) | - | 2110362..2110652 (-) | 291 | WP_049513323.1 | thiamine-binding protein | - |
| ACLV7D_RS10040 (SMIF22_19920) | cbpD | 2110906..2112024 (-) | 1119 | WP_112444678.1 | choline binding-anchored murein hydrolase CbpD | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90116.86 Da Isoelectric Point: 5.8305
>NTDB_id=1170399 ACLV7D_RS10010 WP_173218772.1 2104856..2107288(-) (clpC) [Streptococcus mitis isolate S. mitis F22]
MNYSKALNECIESAYMVAGHFGAHYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPVEMAKMSVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKADDSGLSPADKALMDGKWKQAAQLIAKEEEVLVYKDLVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRILQTEVEDKLAELLLKGELEAGSTLKIGV
KAGRLKFDIA
MNYSKALNECIESAYMVAGHFGAHYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPVEMAKMSVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKADDSGLSPADKALMDGKWKQAAQLIAKEEEVLVYKDLVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRILQTEVEDKLAELLLKGELEAGSTLKIGV
KAGRLKFDIA
Nucleotide
Download Length: 2433 bp
>NTDB_id=1170399 ACLV7D_RS10010 WP_173218772.1 2104856..2107288(-) (clpC) [Streptococcus mitis isolate S. mitis F22]
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTCATTATCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCCAATCACAGTTATAGTGTGGCAGGGGCGACTTTAAATGATTATCCATATGAGA
TGGACCGTTTAGAAGAGGTCGCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACCTTTACGGAATTGCCGTTC
TCCCATCGCTTGCAGGTCCTTTTTGATGAAGCAGAGTATGTAGCGTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
CGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATCTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCCCTTCGTCGAAATTTAGAAGAACGTGCAGGCTGGACTCGTGAAGACCTCAAGGCT
CTACGCCAACGCCATCGTACAGTAGCTGACAAGCAAAATTCTATGGCCAATATGATGGGCATGCCGCAGACTCCGAGTGG
TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGATAAGG
AAATCTCGCGTATGATTCAAATCTTGAGTCGAAAGACCAAGAATAATCCTGTCTTGGTTGGGGATGCTGGTGTCGGGAAG
ACAGCTCTAGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGGGATGTGCCTGTGGAAATGGCTAAGATGAGCGTGTTAGA
GCTGGATTTGATGAATGTCGTTGCAGGGACACGTTTCCGTGGTGACTTTGAAGAGCGCATGAACAATATCATCAAGGATA
TTGAAGAAGATGGGCAAGTAATCCTCTTTATCGACGAACTCCACACCATCATGGGTTCTGGGAGCGGGATTGATTCGACC
CTGGATGCGGCTAATATCTTGAAGCCAGCCTTGGCGCGTGGAACTTTGAGAACTGTTGGTGCGACTACTCAGGAAGAATA
TCAAAAACATATCGAAAAAGATGCGGCCCTTTCTCGTCGTTTCGCTAAAGTAACGATTGAAGAGCCAAGTGTAGCAGACA
GCATGACCATTTTGCAAGGCTTGAAGGCGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAAGCGGTTGAAACA
GCGGTTAAGATGGCTCATCGTTACTTGACTAGTCGTCACTTGCCAGACTCTGCTATCGATCTCTTGGATGAGGCAGCAGC
AACAGTGCAAAATAAGGCAAAGCATGTAAAAGCAGACGATTCAGGTTTGAGTCCAGCTGACAAGGCCTTGATGGATGGTA
AGTGGAAACAGGCAGCTCAGCTAATTGCAAAAGAAGAGGAAGTGCTTGTTTACAAAGACTTGGTGACAGAGTCTGATATT
TTGACCACCTTGAGTCGCTTGTCAGGTATTCCAGTCCAAAAACTGACTCAGACTGATGCTAAGAAATACCTGAATCTGGA
AGCTGAACTACACAAACGTGTCATTGGTCAAGATCAAGCTGTTTCAAGCATTAGCCGTGCCATTCGCCGCAACCAGTCAG
GGATTCGCAGTCACAAGCGTCCGATTGGCTCCTTTATGTTCCTAGGGCCTACGGGTGTCGGAAAAACTGAATTAGCCAAG
GCTTTGGCAGAAGTTCTTTTTGACGACGAATCAGCCCTTATTCGATTTGATATGAGTGAATATATGGAGAAATTCGCAGC
CAGCCGTCTCAACGGAGCTCCTCCGGGTTATGTGGGTTATGAAGAAGGTGGGGAGTTGACCGAGAAGGTTCGCAACAAAC
CCTATTCCGTTCTCCTTTTTGACGAGGTAGAGAAGGCCCACCCAGATATCTTTAATGTTCTCTTGCAGGTCTTGGATGAC
GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATTATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGTGATGACAAGACTGTCGGATTTGGGGCTAAGGACATTCGTTTTGACCAGGAGAATATGGAGAAACGCATGT
TCGAAGAGCTGAAAAAGGCTTATAGACCGGAATTCATCAACCGCATTGATGAAAAGGTGGTCTTCCATAGCCTGTCTAGC
GACCATATGCAGGAAGTGGTGAAGATTATGGTTAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGCATTGATTTGAAATT
ACAAGCTTCAGCACTGAAATTGTTGGCAAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAATCCTGC
AAACAGAAGTGGAGGACAAGTTGGCAGAACTTCTTCTCAAGGGAGAATTAGAGGCAGGTAGCACACTTAAGATTGGTGTT
AAAGCAGGCCGGTTAAAATTTGATATTGCATAA
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTCATTATCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCCAATCACAGTTATAGTGTGGCAGGGGCGACTTTAAATGATTATCCATATGAGA
TGGACCGTTTAGAAGAGGTCGCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACCTTTACGGAATTGCCGTTC
TCCCATCGCTTGCAGGTCCTTTTTGATGAAGCAGAGTATGTAGCGTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
CGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATCTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCCCTTCGTCGAAATTTAGAAGAACGTGCAGGCTGGACTCGTGAAGACCTCAAGGCT
CTACGCCAACGCCATCGTACAGTAGCTGACAAGCAAAATTCTATGGCCAATATGATGGGCATGCCGCAGACTCCGAGTGG
TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGATAAGG
AAATCTCGCGTATGATTCAAATCTTGAGTCGAAAGACCAAGAATAATCCTGTCTTGGTTGGGGATGCTGGTGTCGGGAAG
ACAGCTCTAGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGGGATGTGCCTGTGGAAATGGCTAAGATGAGCGTGTTAGA
GCTGGATTTGATGAATGTCGTTGCAGGGACACGTTTCCGTGGTGACTTTGAAGAGCGCATGAACAATATCATCAAGGATA
TTGAAGAAGATGGGCAAGTAATCCTCTTTATCGACGAACTCCACACCATCATGGGTTCTGGGAGCGGGATTGATTCGACC
CTGGATGCGGCTAATATCTTGAAGCCAGCCTTGGCGCGTGGAACTTTGAGAACTGTTGGTGCGACTACTCAGGAAGAATA
TCAAAAACATATCGAAAAAGATGCGGCCCTTTCTCGTCGTTTCGCTAAAGTAACGATTGAAGAGCCAAGTGTAGCAGACA
GCATGACCATTTTGCAAGGCTTGAAGGCGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAAGCGGTTGAAACA
GCGGTTAAGATGGCTCATCGTTACTTGACTAGTCGTCACTTGCCAGACTCTGCTATCGATCTCTTGGATGAGGCAGCAGC
AACAGTGCAAAATAAGGCAAAGCATGTAAAAGCAGACGATTCAGGTTTGAGTCCAGCTGACAAGGCCTTGATGGATGGTA
AGTGGAAACAGGCAGCTCAGCTAATTGCAAAAGAAGAGGAAGTGCTTGTTTACAAAGACTTGGTGACAGAGTCTGATATT
TTGACCACCTTGAGTCGCTTGTCAGGTATTCCAGTCCAAAAACTGACTCAGACTGATGCTAAGAAATACCTGAATCTGGA
AGCTGAACTACACAAACGTGTCATTGGTCAAGATCAAGCTGTTTCAAGCATTAGCCGTGCCATTCGCCGCAACCAGTCAG
GGATTCGCAGTCACAAGCGTCCGATTGGCTCCTTTATGTTCCTAGGGCCTACGGGTGTCGGAAAAACTGAATTAGCCAAG
GCTTTGGCAGAAGTTCTTTTTGACGACGAATCAGCCCTTATTCGATTTGATATGAGTGAATATATGGAGAAATTCGCAGC
CAGCCGTCTCAACGGAGCTCCTCCGGGTTATGTGGGTTATGAAGAAGGTGGGGAGTTGACCGAGAAGGTTCGCAACAAAC
CCTATTCCGTTCTCCTTTTTGACGAGGTAGAGAAGGCCCACCCAGATATCTTTAATGTTCTCTTGCAGGTCTTGGATGAC
GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATTATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGTGATGACAAGACTGTCGGATTTGGGGCTAAGGACATTCGTTTTGACCAGGAGAATATGGAGAAACGCATGT
TCGAAGAGCTGAAAAAGGCTTATAGACCGGAATTCATCAACCGCATTGATGAAAAGGTGGTCTTCCATAGCCTGTCTAGC
GACCATATGCAGGAAGTGGTGAAGATTATGGTTAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGCATTGATTTGAAATT
ACAAGCTTCAGCACTGAAATTGTTGGCAAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAATCCTGC
AAACAGAAGTGGAGGACAAGTTGGCAGAACTTCTTCTCAAGGGAGAATTAGAGGCAGGTAGCACACTTAAGATTGGTGTT
AAAGCAGGCCGGTTAAAATTTGATATTGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
98.519 |
100 |
0.985 |
| clpC | Streptococcus pneumoniae D39 |
98.519 |
100 |
0.985 |
| clpC | Streptococcus pneumoniae TIGR4 |
98.519 |
100 |
0.985 |
| clpC | Streptococcus mutans UA159 |
67.036 |
100 |
0.673 |
| clpC | Streptococcus thermophilus LMD-9 |
66.093 |
100 |
0.664 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.971 |
100 |
0.663 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.854 |
100 |
0.5 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.229 |
99.63 |
0.451 |
| clpE | Streptococcus mutans UA159 |
48.83 |
79.136 |
0.386 |
| clpE | Streptococcus pneumoniae Rx1 |
46.994 |
78.025 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
46.994 |
78.025 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
46.994 |
78.025 |
0.367 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.299 |
78.395 |
0.363 |