Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACLV7A_RS01475 Genome accession   NZ_OZ217344
Coordinates   278264..279301 (+) Length   345 a.a.
NCBI ID   WP_411863400.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis E22     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 273264..284301
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7A_RS01440 (SMIE22_02760) yidC 273300..274226 (-) 927 WP_411863399.1 membrane protein insertase YidC -
  ACLV7A_RS01445 (SMIE22_02770) - 274304..274582 (-) 279 WP_020903085.1 acylphosphatase -
  ACLV7A_RS01450 (SMIE22_02780) - 274616..275356 (+) 741 WP_368079092.1 TrmH family RNA methyltransferase -
  ACLV7A_RS01455 (SMIE22_02790) - 275412..276095 (+) 684 WP_001016913.1 Bax inhibitor-1 family protein -
  ACLV7A_RS01460 (SMIE22_02800) asnA 276206..277198 (+) 993 WP_000748005.1 aspartate--ammonia ligase -
  ACLV7A_RS01465 (SMIE22_02810) rsmD 277263..277802 (+) 540 WP_000706954.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACLV7A_RS01470 (SMIE22_02820) coaD 277792..278280 (+) 489 WP_261060069.1 pantetheine-phosphate adenylyltransferase -
  ACLV7A_RS01475 (SMIE22_02830) sepM 278264..279301 (+) 1038 WP_411863400.1 SepM family pheromone-processing serine protease Regulator
  ACLV7A_RS01480 (SMIE22_02840) - 279359..279589 (+) 231 WP_078135418.1 DUF1146 family protein -
  ACLV7A_RS01485 (SMIE22_02850) murA 279613..280896 (+) 1284 WP_411863401.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ACLV7A_RS01490 (SMIE22_02860) - 280889..281077 (+) 189 WP_162499100.1 DNA-directed RNA polymerase subunit beta -
  ACLV7A_RS01495 (SMIE22_02870) endA 281116..281940 (+) 825 WP_411863402.1 DNA/RNA non-specific endonuclease Machinery gene
  ACLV7A_RS01500 (SMIE22_02880) - 282095..283426 (+) 1332 WP_411863403.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37446.47 Da        Isoelectric Point: 5.4227

>NTDB_id=1170264 ACLV7A_RS01475 WP_411863400.1 278264..279301(+) (sepM) [Streptococcus mitis isolate S. mitis E22]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKINDTEDQAAGAYHFVTVGVQHATLAHMVYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARSGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1170264 ACLV7A_RS01475 WP_411863400.1 278264..279301(+) (sepM) [Streptococcus mitis isolate S. mitis E22]
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCGGCCTTGATTGTGACCTTCTTGGCATTTGTAGTGCCCTTGCC
ATACTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTCAAAATCAATGACACAGAAGATCAGGCGGCTG
GTGCCTATCACTTTGTTACGGTTGGTGTCCAGCATGCCACATTAGCTCATATGGTTTATGCTTGGTTGACGCCTTTTACA
GATATTCGTAGTGCCCAGGAGACCACAGGTGGTTCTTCCGATGTAGAATTTATGCGGATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGTCTAAAAACAGCTGGTAAGGATATCGAACTAAAGTACTTTGGGGTTTATGTCT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACGGTCACAGCAGTCAATGATCAGACATTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGACTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGTAAGATTATCACCTTGGAAAATGGCAAAAATGGGATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGGTCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
GAATGTGGGGGATATTGGAGGTATTGACAAGAAAGTTGTAGCTTCTGCTAGGTCAGGTGCCGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAAGCGCATCCTGATGCTAAAAACAACTACCAAACAGCCCTAGAAGCGGCCAAA
ACAATCAAGACAGATATGAAAATCGTGCCTGTTAAAACCCTACAAGATGCAATTGATTACTTGAAAAACAATCCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

58.48

99.13

0.58


Multiple sequence alignment