Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACLV7Z_RS08460 Genome accession   NZ_OZ217343
Coordinates   1692614..1693345 (-) Length   243 a.a.
NCBI ID   WP_218774470.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1687614..1698345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS08425 (SMIG22_16600) blpC 1687911..1688066 (+) 156 WP_218774474.1 quorum-sensing system pheromone BlpC -
  ACLV7Z_RS08430 (SMIG22_16610) - 1688109..1689449 (-) 1341 WP_218774473.1 sensor histidine kinase -
  ACLV7Z_RS08435 (SMIG22_16620) comE/blpR 1689463..1690200 (-) 738 WP_218774472.1 response regulator transcription factor Regulator
  ACLV7Z_RS08440 (SMIG22_16630) - 1690205..1690543 (-) 339 WP_150922867.1 LytTR family DNA-binding domain-containing protein -
  ACLV7Z_RS08445 (SMIG22_16640) - 1690902..1691153 (+) 252 WP_001130045.1 hypothetical protein -
  ACLV7Z_RS08450 (SMIG22_16650) - 1691182..1691505 (+) 324 WP_000131861.1 hypothetical protein -
  ACLV7Z_RS08455 (SMIG22_16660) - 1691568..1692617 (-) 1050 WP_218774471.1 ABC transporter permease -
  ACLV7Z_RS08460 (SMIG22_16670) pptA 1692614..1693345 (-) 732 WP_218774470.1 ABC transporter ATP-binding protein Regulator
  ACLV7Z_RS08465 (SMIG22_16680) - 1693413..1693823 (+) 411 WP_001278317.1 HIT family protein -
  ACLV7Z_RS08470 (SMIG22_16690) - 1693833..1694120 (+) 288 WP_218774469.1 hypothetical protein -
  ACLV7Z_RS08475 (SMIG22_16700) dnaJ 1694521..1695657 (-) 1137 WP_218774468.1 molecular chaperone DnaJ -
  ACLV7Z_RS08480 (SMIG22_16710) - 1695936..1696337 (-) 402 WP_218774467.1 tRNA (guanine-N7)-methyltransferase -
  ACLV7Z_RS08485 (SMIG22_16730) dnaK 1696339..1698162 (-) 1824 WP_000034667.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27114.67 Da        Isoelectric Point: 4.7852

>NTDB_id=1170224 ACLV7Z_RS08460 WP_218774470.1 1692614..1693345(-) (pptA) [Streptococcus mitis isolate S. mitis G22]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLIPYSGSININGLTLQEDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFDRVESLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLDVEKKKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREVFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1170224 ACLV7Z_RS08460 WP_218774470.1 1692614..1693345(-) (pptA) [Streptococcus mitis isolate S. mitis G22]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTCCATGTCCCTGTCTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTAGTTGGTTTGATTGGTCTCAATGGCGCTGGTAAATCGACGACAATCAATGAGATTATCGGTCTGTTGATACCTT
ATAGTGGCTCCATTAATATCAATGGCTTGACCCTGCAAGAAGATGCGACAAGTTACCGCAAGCAAATTGGCTACATTCCA
GAAACGCCTAGCTTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCCATGGCTTATGGTATTGAGCAGAA
AGTGGCTTTTGATCGAGTAGAATCTTTGTTAAAAATGTTTCGTCTGGACCAGAAATTGGACTGGTTCCCAGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTAGATCCAAGTCTTTTTATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTGCGGACTTGATTCAGCTTTTGGATGTTGAAAAGAAAAAGGGCAAGTCCATTCTTAT
GAGTACCCACGTGCTGGATTCAGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAGG
GAAATCTCCTGCAACTGCGCGAAGTCTTTGATATGCCTGAGGCTAGTTTGAACGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGTTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.199

99.177

0.716
  pptA Streptococcus thermophilus LMD-9

71.369

99.177

0.708

Multiple sequence alignment